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. 2024 Sep 2;18:92. doi: 10.1186/s40246-024-00665-x

Table 3.

Chemical structure descriptors that were significantly negatively correlated with iPSC-derived cardiomyocyte bioactivity phenotypes after exposure to PFAS

Descriptor IDa Phenotype(s) N of Donorsb N of Subst.c Descriptor Meaning
Atoms
SGR10004 [-] Chronotrope 11 56 Fluorine (≥ 5 fluorine atoms present)
Asystole 4
SGR10013 [-] Chronotrope 7 56 Any carbon
Asystole 5
SGR10022 [-] Chronotrope 8 56 sp3 Carbon
Asystole 5
SGR10029 [-] Chronotrope 10 56 Any non-carbon
Asystole 4
Cytotoxicity 2
SGR10043 [-] Chronotrope 12 56 Tetrasubstituted sp3 carbon
Asystole 4
Cytotoxicity 1
SGR10068d [+] Chronotrope 1 9 Oxygen with two heavy atom substitutions
SGR10032d [+] Chronotrope 2 3 Methyl-group
Atom Pairs
SGR10521 [-] Chronotrope 11 54 Two halogens, 3 bonds away (≥ 4 occurrences)
Asystole 3
SGR10553 [-] Chronotrope 12 53 Two halogens, 4 bonds away (≥ 4 occurrences)
Asystole 3
SGR10583 [-] Chronotrope 10 44 Two halogens, 5 bonds away (≥ 4 occurrences)
Asystole 4
Cytotoxicity 2
SGR10786d [+] Chronotrope 5 8 OH-mediated intramolecular hydrogen-bonds
SGR10112d [+] Chronotrope 4 7 Two oxygens, 3 bonds away
SGR10199d [+] Chronotrope 2 3 Two oxygens, 5 bonds away
Bioavailability

SGR10261,

SGR10780

[-] Chronotrope 13 56 F-C-F group (≥ 3 occurrences)
Asystole 4
SGR10805 [-] Chronotrope 6 51 X-C-X moiety (X = O, N, or F)
Asystole 3

SGR10633,

SGR10708d

[+] Chronotrope 1 17 Primary alkyl bonded to O, N,S, or P atoms

SGR10275,

SGR10295d

[+] Chronotrope 1 12 Primary alcohol
SGR10169d [+] Chronotrope 1 8 Dialkyl ether
SGR10795d Cytotoxicity 1 4 Primary carbon bonded to 2 fluorines
Asystole 1
SGR10290d [+] Chronotrope 5 3 Ethylene glycols and their mono-ethers

SGR10418,

SGR10493,

SGR10684,

SGR10736 d

[+] Chronotrope 2 3 Secondary alcohol
SGR10354d [+] Chronotrope 5 2 Isopropanol moiety
SGR10668d [+] Chronotrope 3 2 Methoxy or methylamino group
Functional Groups

SGR10009

SGR10205

[-] Chronotrope 11 56 Fluorine bonded to aliphatic carbon (≥ 5 occurrences)
Asystole 4
SGR10308 [-] Chronotrope 10 56 Potential hydrogen-bond acceptors (≥ 6 occurrences)
Asystole 4
Cytotoxicity 2
SGR10829 [+] Chronotrope 1 55 Potential hydrogen-bond donors
SGR10428 [-] Chronotrope 11 54 1,2-Dihalogenated ethyl (≥ 4 occurrences)
Asystole 3
SGR10092 [-] Chronotrope 10 53 1,1,2,2-Tetrafluorinated ethyl
Asystole 3
SGR10797 [-] Chronotrope 6 50 -CF2- or -O-CF- moiety
Asystole 3
SGR10057 [-] Chronotrope 9 47 1,2,3-Trifluorinated propyl (≥ 6 occurrences)
Asystole 3
SGR10072, SGR10761d [+] Chronotrope 1 14 Hydroxyl attached to sp3 carbon
SGR10203d [+] Chronotrope 1 8 Ether
SGR10153d [+] Chronotrope 1 7 Sulfur bonded to 3 heavy atoms
SGR10109d [+] Chronotrope 2 3 CH-OH moiety
SGR10343d [-] Chronotrope 1 3 Any primary amine
SGR10289d [+] Chronotrope 5 2 Ethylene glycol diol
SGR10587, SGR10099, SGR10703d [+] Chronotrope 3 2 Sulfonamide
Asystole 2
Topology
SGR10704d Cytotoxicity 11 2 Polyether motifs as in PEGs
[+] Chronotrope 2
SGR10749d [+] Chronotrope 5 2 1,2-disubstituted ethanol

a Saagar descriptors that were significantly correlated with iPSC-derived cardiomyocyte phenotypes can be found in Table S18. Correlation coefficients and corresponding q-values for the donors and phenotypes with significant (q < 0.1) associations can be found in Table S19

b Number of donors with significant (q < 0.1) associations from a total of 16 tested

c Number of PFAS with significant (q < 0.1) associations from a total of 56 tested

d Saagar descriptors with corresponding structural features for each PFAS, highlighting the region that describes the particular Saagar descriptor can be found in Fig. S7