Table 1. List of transiently upregulated genes.
| Operon | ||
|---|---|---|
| Oxidoreductase | ||
| sll0741 | nifJ/‘pyruvate-ferredoxin/flavodoxin oxidoreductase’ | TU3296 |
| sll0743 | Hypothetical protein | |
| sll0744 | Dihydroorotate dehydrogenase (fumarate) | |
| sll1221 | hoxF/‘bidirectional [NiFe] hydrogenase diaphorase subunit’ | TU1714 |
| sll1222 | Unknown protein | |
| sll1223 | hoxU/‘bidirectional [NiFe] hydrogenase diaphorase subunit’ | |
| sll1224 | hoxY/‘NAD-reducing hydrogenase small subunit’ | |
| sll1225 | Unknown protein | |
| sll1226 | hoxH/‘NAD-reducing hydrogenase large subunit’ | |
| slr1434 | pntB/‘H+-translocating NAD(P) transhydrogenase subunit beta’ | TU1089 |
| Transporter | ||
| sll1450 | nrtA/‘nitrate/nitrite transport system substrate binding protein’ | TU1023 |
| sll1451 | nrtB/‘nitrate/nitrite transport system permease protein’ | |
| sll1452 | nrtC/‘nitrate/nitrite transport system ATP binding protein’ | |
| sll1453 | nrtD/‘nitrate/nitrite transport system ATP binding protein’ | |
| Two-component system | ||
| slr1214 | Twitching motility two-component system response regulator PilG | TU905 |
| slr1215 | Unknown protein | TU907 |
| Glycosyl transferase | ||
| slr2116 | spsA/‘spore coat polysaccharide biosynthesis protein; SpsA’ | TU1673 |
| Protease | ||
| sll1009 | frpC/‘iron-regulated protein’ | TU491 |
| Insertion sequence (transposase) | ||
| slr1523 | Transposase | TU1659 |
| sll1985 | Transposase | TU1589 |
| sll7001 | Transposase | NA |
| sll7003 | Toxin FitB | TU7001 |
| ssl0172 | Transposase | TU3163 |
| Other | ||
| slr1260 | Hypothetical protein | TU1446 |
| slr0668 | Unknown protein | TU3532 |
| slr5127 | Unknown protein | TU5127 |
| sll0710 | Unknown protein | TU97 |
| sll1307 | Unknown protein | TU1224 |
The list of transiently upregulated genes was merged by transcriptional units and sorted by function. The transcriptional unit information was obtained from a previous study (Kopf et al., 2014).