Figure 4.

Cell-type co-localization analysis of spatially reconstructed SC data of the mouse embryo at E8.5

(A) Relationships between Moran’s R and the p values of all cell-type pairs derived from SeqFISH embryo 1 L1.

(B) Reference cell-type co-localization patterns. We incorporated six SeqFISH datasets; the value of reference support indicates the number of datasets demonstrating significant signals ($p\le 0.05$).

(C) Reconstructed spatial locations of the SC sample and its ST reference (SeqFISH embryo 1 L1).

(D) Detected p values of cell-type co-localizations based on a spatially reconstructed SC sample.

(E) Detected co-localization proportions in the SC sample vs. reference patterns.