TABLE 3.
Gene | Culture (passage) | Name | Nucleotide | Reference | Allele | Frequency | Amino acid | Reference | Mutation | ||
---|---|---|---|---|---|---|---|---|---|---|---|
P1 | P3 | P5 | |||||||||
P | HBTEC-ALI | PIV3_Fukushima_O726_2019 (C protein) | 2090 | G | C | -a | 17.2 | 52.9 | 103 (99) | E (R) | Q (S) |
Vero/TMPRSS2 | PIV1_Fukushima_O425_2018 | 1977 | A | C | - | 30.1 | 66.6 | 53 | I | L | |
PIV3_Fukushima_O644_2019 | 2420 | G | A | - | 86.7 | 70.8 | 210 | D | N | ||
M | Vero/TMPRSS2 | PIV1_Fukushima_O425_2018 | 4273 | G | A | - | 70.4 | 68.6 | 210 | V | M |
PIV2_Fukushima_O861_2019 | 3832 | G | A | - | 60.7 | 52.9 | 119 | S | N | ||
F | Vero/TMPRSS2 | PIV3_Fukushima_O644_2019 | 5242 | A | G | - | 11.6 | 68.4 | 57 | I | M |
L | Vero/TMPRSS2 | PIV1_Fukushima_H171_2018 | 14571 | A | G | - | 80.2 | 99.4 | 1941 | R | G |
PIV1_Fukushima_O425_2018 | 13979 | A | G | - | 22.9 | 64.5 | 1744 | E | G | ||
PIV1_Fukushima_O503_2019 | 14055 | A | C | - | 58.0 | 82.8 | 1769 | Q | H | ||
PIV1_Fukushima_O503_2019 | 14454 | G | A | - | 99.8 | 99.6 | 1902 | M | I | ||
PIV2_Fukushima_O33_2018 | 14477 | C | T | - | 40.3 | 63.2 | 1894 | S | L | ||
PIV2_Fukushima_O836_2019 | 12281 | A | T | - | 29.5 | 88.0 | 1165 | E | V | ||
Vero | PIV2_Fukushima_O33_2018 | 13475 | C | T | - | 46.5 | 74.3 | 1560 | P | L | |
PIV2_Fukushima_O836_2019 | 11898 | G | T | - | - | 82.3 | 1037 | K | N | ||
PIV2_Fukushima_O836_2019 | 15167 | G | A | - | - | 83.7 | 2127 | G | D |
-, not detected.