Table 3.
Cross event/families | Locus filter | Num. loci | Num. assign. | Num. possible assign. | Percent assigned | Num. false positive (FP) | Percent assigns as FP |
---|---|---|---|---|---|---|---|
OFR5 | all filtered loci | 364 | 134 | 172 | 77.9% | 11 | 7.6% |
OFR5 | Remove loci with ≥ 4 incompatibilities | 328 | 160 | 172 | 93.0% | 8 | 4.8% |
MBP CHR8 | all filtered loci | 324 | 163 | 215 | 75.8% | 7 | 4.1% |
MBP CHR8 | Remove loci with ≥ 4 incompatibilities | 289 | 185 | 215 | 86.0% | 17 | 8.4% |
The number of loci present in the dataset, the number of assignments and percentage of possible assignments, as well as the number of false positives and percentage of assignments made as false positives are shown. The datasets with loci having more than four incompatibilities removed were used for downstream analyses.