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. 2024 Apr 4;11:1294. Originally published 2022 Nov 11. [Version 2] doi: 10.12688/f1000research.126721.2

Table 1. List of online resources employed for profiling CEACAM6 literature/transcriptional data, including those generated as part of the present work.

Resource name/Description Use Link Reference
CEACAM6 Interactive Circle Packing Plot Aggregation and dissemination of information derived from the literature and transcriptional data profiling efforts https://prezi.com/view/pQ7TKEC6tgY3cuik9ckt/ Present work
Generic information capture form Excel spreadsheet employed for structuring relevant information captured via the screening of CEACAM6 literature or transcript abundance profiles https://doi.org/10.6084/m9.figshare.21183718.v1 Present work, Extended Data File 1 20
Prevalence of disease or cell type entities in the CEACAM6 literature Prioritization of disease or cell types associated with CEACAM6 https://doi.org/10.6084/m9.figshare.21183748.v1 Present work, Extended Data File 2 30
Information captured from the literature identifying CEACAM6 as a candidate biomarker This information can be used as a basis for deciding whether to include CEACAM6 in a targeted panel https://doi.org/10.6084/m9.figshare.21183832.v1 Present work, Extended Data File 3 31
Information captured from the literature identifying instances where abundance levels of CEACAM6 blood transcripts differ between cases and controls This information can be used as a basis for deciding whether to include CEACAM6 in a targeted panel https://doi.org/10.6084/m9.figshare.21184357.v1 Present work, Extended Data File 4 56
Transcript abundance measurements for CEACAM6 across 16 reference transcriptome datasets Determining CEACAM6 differential expression and generating graphical representations https://doi.org/10.6084/m9.figshare.21184363.v1 Present work, Extended Data File 5 57
Information captured from reference blood transcriptional datasets for which CEACAM6 transcripts were found to differ between cases and controls This information can be used as a basis for deciding whether to include CEACAM6 in a targeted panel https://doi.org/10.6084/m9.figshare.21184369.v1 Present work, Extended Data File 6 58
Gene Expression Browser (GXB) CD2K instance Access CEACAM6 abundance profiles across multiple reference datasets http://cd2k.gxbsidra.org/dm3/geneBrowser/list 21
Single Cell Portal Identification of scRNAseq datasets where CEACAM6 expression is elevated in one or several cell clusters https://singlecell.broadinstitute.org/single_cell 62