Table 2.
Permutational multivariate analysis of variance (PERMANOVA) results comparing Bongo net communities for nanopore and Illumina datasets, using Bray-Curtis dissimilarity. Variables with significant p-values are highlighted in bold
| Nanopore | |||||
|---|---|---|---|---|---|
| df | Sum of squares | R2 | F-value | p-value | |
| Site | 1 | 0.5841 | 0.08491 | 3.8896 | 0.001 |
| Date | 4 | 1.8744 | 0.27248 | 3.1203 | 0.001 |
| Fraction | 1 | 1.2382 | 0.18000 | 8.2451 | 0.001 |
| Site: Fraction | 1 | 0.2479 | 0.03604 | 1.6510 | 0.090 |
| Date: Fraction | 4 | 0.6818 | 0.09911 | 1.1350 | 0.286 |
| Residual | 15 | 2.2526 | 0.32746 | ||
| Total | 26 | 6.8791 | 1.00000 | ||
| Illumina | |||||
| df | Sum of squares | R2 | F-value | p-value | |
| Site | 1 | 0.5412 | 0.07609 | 3.3736 | 0.001 |
| Date | 4 | 2.0928 | 0.29420 | 3.2611 | 0.001 |
| Fraction | 1 | 1.1031 | 0.15508 | 6.8759 | 0.001 |
| Site: Fraction | 1 | 0.2723 | 0.03828 | 1.6973 | 0.082 |
| Date: Fraction | 1 | 0.6974 | 0.09803 | 1.0867 | 0.354 |
| Residual | 15 | 2.4065 | 0.33831 | ||
| Total | 26 | 7.1133 | 1.00000 | ||