Table 2.

Top SNPs

CHR	POS	Notation	rsID	Nearest Gene	Ref	Alt	FRQ A	FRQ U	R2	O.R.	S.E.	p
17	44101563	17q21.31	rs9468	MAPT	T	C	0.942	0.7696	1.038	4.812	0.07	1.94 × 10−110
1	180943529	1q25.3	rs1044595	STX6	C	T	0.471	0.4064	0.989	1.347	0.039	2.92 × 10−14
6	45454844	6p21.1	rs12197948	RUNX2	A	G	0.705	0.644	1.008	1.328	0.041	5.43 × 10−12
3	39508968	3p22.1	rs631312	MOBP	G	A	0.362	0.2841	0.989	1.461	0.041	4.60 × 10−20
12	21467215	12p12.1	rs7966334	SLCO1A2	C	G	0.086	0.0546	0.967	1.664	0.077	3.66 × 10−11
6	32020238	6p21.32	rs369580	TNXB	A	G	0.886	0.8571	0.999	1.432	0.058	8.11 × 10−10

ref reference allele, Alt alternate allele, FRQ A allele frequency in cases, FRQ U allele frequency in controls, INFO R-squared quality, O.R. Odds ratio (difference between frequency of the alt. allele between the two groups), S.E. Standard error.