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. 2024 Aug 26;15:1424689. doi: 10.3389/fpls.2024.1424689

Table 1.

Single-nucleotide polymorphism (SNP) peaks associated with cell membrane stability detected by the G′ and QTL-Seq methods.

Method CHROM qtl Start End Length No. of SNPs Mean no. of SNP/Mb Peak
Δ(SNP-index)
Mean
Δ(SNP-index)
Max
G′
Mean
G′
G′
Std. dev.
Mean
p-value
Mean
q-value
G′ 1 1 30,617,960 39,961,306 9,343,346 8,393 898 0.058697 0.005874 21.76383 18.97439 2.063647 6.60E-05 0.003042
3 2 15,570,142 22,687,754 7,117,612 11,812 1,660 0.218607 0.024262 17.62806 15.89095 1.569176 0.000194 0.004124
3 3 23,582,145 23,878,378 296,233 252 851 0.009252 0.008254 13.49003 13.14229 0.1408 0.00052 0.008267
3 4 25,872,766 26,814,964 942,198 1,035 1,098 0.313047 0.304769 19.34697 18.5116 0.84721 5.30E-05 0.002777
4 5 5,605 2,144,214 2,138,609 2,956 1,382 0.09567 0.028044 18.02003 16.09915 1.253965 0.000154 0.003774
9 6 19,676,861 19,990,807 313,946 170 541 −0.01015 −0.00407 13.64901 13.24721 0.127193 0.000493 0.007963
11 7 19,861,809 21,359,446 1,497,637 2,943 1,965 0.102444 0.072623 15.00849 14.41921 0.358964 0.000285 0.005587
QTL-seq 1 1 38,413,342 38,853,277 439,935 336 764 −0.270955 −0.260786
3 2 26,139,128 26,800,598 661,470 1,011 1,528 0.312797 0.306599