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. 2024 Jul 25;27(9):110587. doi: 10.1016/j.isci.2024.110587
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Anti-FLAG Millipore Cat#MAB3118; RRID: AB_11213007
Anti-B7-H5/VISTA Cell Signaling Cat#64953; RRID: AB_2799671
Anti-GAPDH Santa Cruz Biotechnology Cat#sc-32233; RRID: AB_627679
Goat anti-mouse 800 Li-Cor Cat#926-32210; RRID: AB_621842
Goat anti-rabbit 680 Li-Cor Cat#926-68071; RRID: AB_10956166
Anti-mouse Alexa Fluor 488 Thermo Scientific Cat#A-11001; RRID: AB_2534069
Anti-rabbit Alexa Fluor 546 Thermo Scientific Cat#A-11060; RRID: AB_2534107

Bacterial and virus strains

E. coli DH5alpha Thermo Scientific 18265017

Biological samples

Tissue microarray containing ccRCC and metastasis specimens Cruces Hospital NA

Critical commercial assays

CellTiter 96® AQueous One Solution Cell Proliferation Assay (MTS) Promega G3581
CellTiter-Glo® 3D Cell Viability Assay Promega G9683

Experimental models: Cell lines

HEK293 ATCC CRL-1573
COS-7 ATCC CRL-1651
786-O ATCC CRL-1932
Caki-1 ATCC HTB-46

Oligonucleotides

Primer B7-H5 N49A Forward
GTCCCGAGGGGCAGGCCGTCACCCTCACCTG
Life Technologies A1561-2
Primer B7-H5 N49A Reverse
CAGGTGAGGGTGACGGCCTGCCCCTCGGGAC
Life Technologies A1561-2
Primer B7-H5 N91A Forward
CCGGCCCATCCGCGCCCTCACGTTCCAGG
Life Technologies A1561-2
Primer B7-H5 N91A Reverse
CCTGGAACGTGAGGGCGCGGATGGGCCGG
Life Technologies A1561-2
Primer B7-H5 N108A Forward
GCCACCAGGCTGCCGCCACCAGCCACGACCT
Life Technologies A1561-2
Primer B7-H5 N108A Reverse
AGGTCGTGGCTGGTGGCGGCAGCCTGGTGGC
Life Technologies A1561-2
Primer B7-H5 N128A Forward
CCGACCACCATGGCGCCTTCTCCATCACCAT
Life Technologies A1561-2
Primer B7-H5 N128A Reverse
ATGGTGATGGAGAAGGCGCCATGGTGGTCGG
Life Technologies A1561-2
Primer B7-H5 N135A Forward
CATCACCATGCGCGCCCTGACCCTGCTGG
Life Technologies A1561-2
Primer B7-H5 N135A Reverse
CCAGCAGGGTCAGGGCGCGCATGGTGATG
Life Technologies A1561-2
Primer B7-H5 N190A Forward
CCAGGATAGTGAAGCCATCACGGCTGCAG
Life Technologies A1561-2
Primer B7-H5 N190A Reverse
CTGCAGCCGTGATGGCTTCACTATCCTGG
Life Technologies A1561-2
Primer removing DYK/Flag Forward
CCAAACTTTGAGGTCATCTGATAAACCCGCTGATCA
Life Technologies A1561-2
Primer removing DYK/Flag Reverse
TGATCAGCGGGTTTATCAGATGACCTCAAAGTTTGG
Life Technologies A1561-2

Recombinant DNA

pcDNA3.1/C-DYK/Flag B7-H5 GenScript NM_022153.1

Software and algorithms

GEPIA
http://gepia.cancer-pku.cn
Peking University RRID:SCR_018294
NetNGlyc
http://www.cbs.dtu.dk/services/NetNGlyc/
CBS Prediction Servers RRID:SCR_001570
Odessey Image Studio
http://www.licor.com/bio/products/software/image_studio_lite/
Li-Cor RRID:SCR_013715
v.4.0.21 software
ZEN Microscopy software
https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html
ZEISS RRID:SCR_013672
GraphPad Prism
http://www.graphpad.com/
GraphPad RRID:SCR_002798
SPSS Statistics
http://www-01.ibm.com/software/uk/analytics/spss/
IBM RRID:SCR_002865
v.29 software

Other

DMEM Corning Cat#10-017-CV
RPMI 1640 medium Corning Cat#10-040-CV
McCoy’s 5A medium Corning Cat#10-050-CV
FBS Gibco Cat#A5256701
L-Glutamine Lonza Cat#BE17-605E
Penicilin/Streptomycin Lonza Cat#DE17-602E
GenJet SignaGen Cat#SL100489
PBS Corning Cat#21-040-CV
M-PER lysis buffer Thermo Scientific Cat#78501
PhosStop Roche Cat#04 906 837 001
cOmplete protease inhibitor Roche Cat#04 693 132 001
PNGase F New England Biolabs Cat#P0704S
NuPAGE sample buffer Thermo Scientific Cat#NP0008
Prestained molecular marker Sigma Aldrich Cat#SDS7B2
Immobilon ®-FL PVDF Membrane Merck Cat# IPFL00010
Odyssey Blocking Buffer Li-Cor Cat# 927-70001
Mounting fluid with DAPI Abcam Cat# ab104139
PepMute SignaGen Cat#SL100566
siRNAs (siB7-H5#1–4) Qiagen Cat#1027416
dNTPs Thermo Scientific R0193
DpnI Thermo Scientific ER1701
Pwo Roche PWOPOL-RO
OWL HEP-1 transfer system Thermo Scientific Cat#HEP-1
Odyssey CLx Imager Li-Cor Cat#9140-09
ZEISS LSM880 AIRYSCAN Zeiss RRID:SCR_020925
AriaMx Real-Time PCR System Agilent Technologies Cat#G8830A
Mark™ Microplate Absorbance Reader Bio-Rad Cat#168-1130
Infinite® M plex Tecan Cat# 30190085
PTLink Agilent Technologies Cat#PT100
Dako Autostainer Link 48 Agilent Technologies Cat#AS480