Table 2.
Significant variant SNPs of Anti-CGRP monoclonal antibody therapy efficacy in our chronic migraine cohort
| Variant SNP ID |
CHR | BP | Ref | Alt | BETA | SE | L95 | U95 | P-Valuea | Type | Gene | MAFb | TWc | EASd |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs116870564 | 11 | 40,698,550 | G | A | -0.551 | 0.087 | -0.721 | -0.381 | 6.65E-09 | intronic | LRRC4C | 0.009 | 0.026 | 0.027 |
| rs75244870 | 3 | 58,551,849 | T | C | -0.518 | 0.082 | -0.679 | -0.358 | 6.92E-09 | intergenic | ACOX2(Up); FAM107A (Down)e | 0.019 | 0.017 | 0.012 |
| rs56216870 | 8 | 124,758,943 | C | T | -0.518 | 0.084 | -0.683 | -0.352 | 1.77E-08 | intergenic | MTSS1 (Up); MIR4662B (Down) | 0.037 | 0.055 | 0.093 |
| rs12938101 | 17 | 50,298,471 | A | T | -0.483 | 0.081 | -0.641 | -0.324 | 3.85E-08 | intergenic | TMEM92-AS1(Up); XYLT2 (Down) | 0.037 | 0.040 | 0.034 |
| rs74655790 | 2 | 23,769,060 | C | T | -0.509 | 0.086 | -0.677 | -0.341 | 4.24E-08 | intronic | ATAD2B | 0.009 | 0.019 | 0.013 |
| rs149540851 | 8 | 106,592,971 | C | A | -0.509 | 0.086 | -0.677 | -0.341 | 4.24E-08 | intronic | OXR1 | 0.009 | 0.009 | 0.030 |
a Filter by p < 10− 7.
b Minor Allele Frequency in this study.
c Minor Allele Frequency in Taiwan Biobank.
d Minor Allele Frequency in East Asian from 1000 genome.
e Up: Upstream. Down: Downstream.