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. 2024 Sep 7;25(17):9697. doi: 10.3390/ijms25179697

Table 2.

Plasmids used in the study.

Plasmids Relevant Characteristics Sources
pBAD33 Vector containing pBAD promoter with a p15A origin of replication (CmR) [41]
pBbpfD Sequence coding for BpfD (SO_4323) cloned into pBAD33 This work
pBpdgA Sequence coding for PdgA (SO_4552) cloned into pBAD33 [24]
pBpdgB Sequence coding for PdgB (SO_0796) cloned into pBAD33 [24]
pBcheY3 Sequence coding for CheY3 (SO_3209) cloned into pBAD33 [20]
pET52b Vector containing the T7 phage promoter and the coding sequence of StrepTagII (ApR) Novagen
pETbpfD Sequence coding for the cytoplasmic part (S225 to E639) of BpfD (SO_4323) cloned into pET52b This work
pETbpfDGGDEF Sequence coding for the GGDEF domain (S225 to T396) of BpfD (SO_4323) cloned into pET52b This work
pETbpfDEAL Sequence coding for the EAL domain (E397 to E639) of BpfD (SO_4323) cloned into pET52b This work
pETcheY3 Sequence coding for CheY3 (SO_3209) cloned into pET52b [24]
pETpdgB Sequence coding for PdgB (SO_0796) into pET21b [24]
pEB355 pUT18C derivative, coding for the T18 domain of the adenylate cyclase of Bordetella pertussis [37]
pUT18-bpfD Sequence coding for the cytoplasmic part (S225 to E639) of BpfD (SO_4323) cloned in frame at the 3’ extremity of the sequence coding for the T18 domain into pEB355 This work
pUT18-zip Sequence coding for a leucine zipper region cloned in-frame with the T18 domain (positive control) [37]
pEB354 pKT25 derivative, coding for the T25 domain of the adenylate cyclase of B. pertussis [37]
pKT25-SO4324 Sequence coding for SO_4324 cloned in frame at the 3’ end of the sequence coding for the T25 domain into pEB354 This work
pKT25-cheY3 Sequence coding for CheY3 (SO_3209) cloned in frame at the 3’ end of the sequence coding for the T25 domain into pEB354 [24]
pKT25-pdgA Sequence coding for PdgA (SO_4552) cloned in frame at the 3’ end of the sequence coding for the T25 domain into pEB354 [24]
pKT25-pdgB Sequence coding for PdgB (SO_0796) cloned in frame at the 3’ end of the sequence coding for the T25 domain into pEB354 [24]
pKT25-zip Sequence coding for a leucine zipper region cloned in-frame with the T25 domain (positive control) [37]
pBAD24 Vector containing pBAD promoter (ApR) [41]
pBAD24-CBP-linker Sequence coding for the calmodulin-binding protein (CBP) cloned into pBAD24 [42]
pBcbp-bpfD Sequence coding for the cytoplasmic part (S225 to E639) of BpfD (SO_4323) cloned in frame at the 3’ extremity of the sequence coding for the calmodulin-binding protein (CBP) into pBAD24-CBP-linker This work
pKNG101 R6K-derived suicide plasmid containing StrR and sacB [39]
pRK2013 RK2-Tra1 RK2-Mob1 KmR ori ColE1 [43]