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. Author manuscript; available in PMC: 2024 Sep 17.
Published in final edited form as: Nat Protoc. 2023 Nov 23;19(2):487–516. doi: 10.1038/s41596-023-00914-8

Table 10 ∣.

An example of the ‘mutation_burden.csv’ file

Bulk ID Cell ID Size of reference
genome (bp)
No. bases in the reference
genome covered by at least
20× in both the single cell
and its corresponding bulk
SNV
sensitivity
INDEL
sensitivity
No.
observed
SNVs
No. observed
INDELs
SNV
burden
INDEL
burden
LZBC01BB LZBC01B1 3,217,346,917 1,079,630,695 0.84 0.81 462 17 1647.5 62.5
LZBC01BB LZBC01B2 3,217,346,917 992,580,939 0.82 0.80 445 13 1764.4 52.4
LZBC01BB LZBC01B3 3,217,346,917 1,048,853,241 0.83 0.81 523 15 1939.7 57.1
LZBC01BB LZBC01B4 3,217,346,917 926,174,542 0.82 0.80 419 14 1778.2 60.5