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. 2024 Aug 8;300(9):107642. doi: 10.1016/j.jbc.2024.107642

Table 1.

qPCR Primer Sequences

ChIP primer Forward sequence 5′ - 3′ Reverse sequence 5′ - 3′
 MYC-P0 AGGCAACCTCCCTCTCGCCCTA AGCAGCAGATACCGCCCCTCCT
 MYC-P1 ATAATGCGAGGGTCTGGAC CAGCGAGTTAGATAAAGCCC
 MYC Exon 2 CCCTCAACGTTAGCTTCACC AGCAGCTCGAATTTCTTCCA
 MYC Exon 3 CAGATCAGCAACAACCGAAA GTTTTCCAACTCCGGGATCT
 MYC-A AAATCAAGGGCAGGGACCACAG CAGAATGGCAGAGTGAGGGGACAT
 MYC-B CAGGGCTTATTGTTGGGACAGAGTAGT CGAAAACGCTCACGATTCACAGA
 MYC-C AGGGTGGACAAGCACAAGCATTA ATTGGGACCTTTGGAGGCAAGAAT
 MYC-D CTTCTGCTCCCTTCTCTTCTCTCAGT ACCACCACACTCCATCTTTCCAAC
 MYC-E GAGGGCGATAAAAGGGACAAGGA GATGTTTGCTGGAACGCTGCTC
RT-qPCR Primer
 GAPDH ACAGCGACACCCACTCCTCC GAGGTCCACCACCCTGTTGC
 MYC Exon 2 CCCTCAACGTTAGCTTCACC AGCAGCTCGAATTTCTTCCA

MYC, c-MYC; P0, promoter upstream of the MYC gene; P1, promoter near the transcription start site with the primer set amplicon providing some overlap into exon1 of the MYC gene; MYC-A through MYC-E, each of the five enhancers within the MYC super-enhancer; GAPDH, glyceraldehyde-3-phosphate dehydrogenase.