Antibodies |
|
Anti-myc (Rb) (used at 1:2,000) |
Cell Signaling Technology |
71D10 |
Anti-GluR6/7 (b), clone NL9 (used at 1:5,000) |
Merck Millipore |
04-921 |
|
Chemicals, peptides, and recombinant proteins |
|
Poly-L-lysine solution |
Merck |
P4707 |
Boric acid, 98% |
Merck |
B0394 |
Sodium tetraborate (Borax) |
Merck |
221732 |
Triton X-100 |
Thermo Fisher Scientific |
28313 |
Sodium dodecyl sulfate (SDS) |
Merck |
L3771 |
Bromophenol blue |
Merck |
B8026 |
2-Mercaptoethanol (βME) |
Merck |
97622 |
Tris-(2-Carboxyethyl) phosphine (TCEP) Bond-Breaker |
Merck |
77720 |
Hydroxylamine solution (NH2OH) |
Merck |
438227 |
Tetramethylethylenediamine (TEMED) |
Merck |
M3148-100ML |
Methoxypolyethylene glycol maleimide (MPEG) – 10k |
Merck |
99126-64-4 |
N-ethylmaleimide (NEM) |
Merck |
04256-5G |
Ethylenediaminetetraacetic acid (EDTA) |
Merck |
E5134-506 |
Chloroform, 99+% |
Merck |
372978 |
Methanol, 99.8% |
Merck |
34860 |
PageRuler prestained protein ladder, 10–180 kDa |
Thermo Fisher Scientific |
26616 |
Classico western HRP substrate, 500 mL |
Immobilon |
WBLUC0500 |
Crescendo western HRP substrate, 500 mL |
Immobilon |
WBLUR0500 |
Forte western HRP substrate, 500 mL |
Immobilon |
WBLUF0500 |
SuperSignal West Femto maximum sensitivity substrate |
Thermo Fisher Scientific |
34096 |
Hank’s balanced salt solution (HBSS) |
Gibco |
24020117 |
Neurobasal medium (NBA) |
Gibco |
21103049 |
Trypsin-EDTA |
Gibco |
25300096 |
GlutaMAX |
Gibco |
35050061 |
Horse serum |
Gibco |
26050088 |
B27 supplement |
Gibco |
17504044 |
Penicillin-Streptomycin (5,000 U/mL) |
Gibco |
15070063 |
Complete protease inhibitor cocktail |
Merck |
11697498001 |
Phosphate-buffered saline (PBS) |
Gibco |
14200-059 |
HyClone sterile purified water |
Cutiva |
SH3052902 |
Glycine |
Severn Biotech |
30-21-60 |
Stripping buffer |
Thermo Fisher Scientific |
46430 |
Ammonium persulfate (APS) |
Thermo Fisher Scientific |
17874 |
TRIS-Base |
Merck |
T1503-1KG |
AcrylaGel |
GeneFlow |
ZT1267631S |
|
Deposited data |
|
Western blots |
Yucel et al.1
|
https://doi.org/10.3389/fnmol.2023.1270849 |
|
Experimental models: Organisms/strains |
|
E17 embryos of adult Han Wistar female rats |
Charles River |
Han Wistar |
|
Recombinant DNA |
|
pXLG3-based lentiviral construct expressing a control, non-targeting shRNA (SCR; target sequence AATTCTCCGAACGTGTCAC) and GFP |
Yucel et al.1
|
https://doi.org/10.3389/fnmol.2023.1270849 |
pXLG3-based lentiviral construct expressing an shRNA targeting GluK2 (target sequence GCCGTTTATGACACTTGGA) and shRNA-resistant YFP-Myc-tagged GluK2 (wild-type or non-palmitoylatable mutant) |
Yucel et al.1
|
https://doi.org/10.3389/fnmol.2023.1270849 |
|
Software and algorithms |
|
Image Studio Lite |
LI-COR |
https://www.licor.com/bio/image-studio/ |
|
Other |
|
6-well cell culture plate |
Greiner Cellstar |
GD657160 |
Sonicator |
Misonix Microson ultrasonic cell disruptor |
NA |
Hemocytometer |
Improved Neubauer |
NA |