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. 2024 Sep 6;5(3):103296. doi: 10.1016/j.xpro.2024.103296
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Anti-myc (Rb) (used at 1:2,000) Cell Signaling Technology 71D10
Anti-GluR6/7 (b), clone NL9 (used at 1:5,000) Merck Millipore 04-921

Chemicals, peptides, and recombinant proteins

Poly-L-lysine solution Merck P4707
Boric acid, 98% Merck B0394
Sodium tetraborate (Borax) Merck 221732
Triton X-100 Thermo Fisher Scientific 28313
Sodium dodecyl sulfate (SDS) Merck L3771
Bromophenol blue Merck B8026
2-Mercaptoethanol (βME) Merck 97622
Tris-(2-Carboxyethyl) phosphine (TCEP) Bond-Breaker Merck 77720
Hydroxylamine solution (NH2OH) Merck 438227
Tetramethylethylenediamine (TEMED) Merck M3148-100ML
Methoxypolyethylene glycol maleimide (MPEG) – 10k Merck 99126-64-4
N-ethylmaleimide (NEM) Merck 04256-5G
Ethylenediaminetetraacetic acid (EDTA) Merck E5134-506
Chloroform, 99+% Merck 372978
Methanol, 99.8% Merck 34860
PageRuler prestained protein ladder, 10–180 kDa Thermo Fisher Scientific 26616
Classico western HRP substrate, 500 mL Immobilon WBLUC0500
Crescendo western HRP substrate, 500 mL Immobilon WBLUR0500
Forte western HRP substrate, 500 mL Immobilon WBLUF0500
SuperSignal West Femto maximum sensitivity substrate Thermo Fisher Scientific 34096
Hank’s balanced salt solution (HBSS) Gibco 24020117
Neurobasal medium (NBA) Gibco 21103049
Trypsin-EDTA Gibco 25300096
GlutaMAX Gibco 35050061
Horse serum Gibco 26050088
B27 supplement Gibco 17504044
Penicillin-Streptomycin (5,000 U/mL) Gibco 15070063
Complete protease inhibitor cocktail Merck 11697498001
Phosphate-buffered saline (PBS) Gibco 14200-059
HyClone sterile purified water Cutiva SH3052902
Glycine Severn Biotech 30-21-60
Stripping buffer Thermo Fisher Scientific 46430
Ammonium persulfate (APS) Thermo Fisher Scientific 17874
TRIS-Base Merck T1503-1KG
AcrylaGel GeneFlow ZT1267631S

Deposited data

Western blots Yucel et al.1 https://doi.org/10.3389/fnmol.2023.1270849

Experimental models: Organisms/strains

E17 embryos of adult Han Wistar female rats Charles River Han Wistar

Recombinant DNA

pXLG3-based lentiviral construct expressing a control, non-targeting shRNA (SCR; target sequence AATTCTCCGAACGTGTCAC) and GFP Yucel et al.1 https://doi.org/10.3389/fnmol.2023.1270849
pXLG3-based lentiviral construct expressing an shRNA targeting GluK2 (target sequence GCCGTTTATGACACTTGGA) and shRNA-resistant YFP-Myc-tagged GluK2 (wild-type or non-palmitoylatable mutant) Yucel et al.1 https://doi.org/10.3389/fnmol.2023.1270849

Software and algorithms

Image Studio Lite LI-COR https://www.licor.com/bio/image-studio/

Other

6-well cell culture plate Greiner Cellstar GD657160
Sonicator Misonix Microson ultrasonic cell disruptor NA
Hemocytometer Improved Neubauer NA