REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Biological samples | ||
Serum and adipose tissue samples from morbid obese subjects before and after GBS intervention | University Hospital of Geneva (Montecucco et al., 2015)14 | Geneva ethical commission approval number 2017-00133. |
Serum and VAT samples from morbid obese non T2D individuals (cohort 2) | Université Clermont Auvergne, France (Hannich et al., 2020)9 | French Ethical Committee SUD EST IV (Agreement 12/111 |
Chemicals, peptides, and recombinant proteins | ||
PC 12:0/12:0 | Avanti Polar Lipids Inc. | Cat#850335; CAS: 18194-25-7 |
PE 17:0/14:1 | Avanti Polar Lipids Inc. | Cat#LM-1104; CAS: 958763-89-8 |
PI 17:0/14:1 | Avanti Polar Lipids Inc. | Cat#LM-1504; CAS: 1246304-61-9 |
PS 17:0/14:1 | Avanti Polar Lipids Inc. | Cat#LM-1304; CAS: 1036814-91-1 |
Cer d18:1/17:0 | Avanti Polar Lipids Inc. | Cat#860517; CAS: 67492-16-4 |
SM d18:1/12:0 | Avanti Polar Lipids Inc. | Cat#860583; CAS: 474923-21-2 |
HexCer d18:1/8:0 | Avanti Polar Lipids Inc. | Cat#860540; CAS: 111956-47-9 |
MTBE (methyl-tert-butyl ether) | Sigma Aldrich | Cat#34875; CAS : 1634-04-4 |
Methylamine solution(33% in absolute ethanol) | Sigma Aldrich | Cat#534102; CAS: 74-89-5 |
Chloroform | Acros Organics | Cat#326820010; CAS: 67-66-3 |
Methanol | Acros Organics | Cat#CAS: 67-56-1 |
n-butanol | Acros Organics | Cat#CAS: 71363 |
Ammonium molybdate(VI) tetrahydrate | Acros Organics | Cat#CAS: 12054-85-2 |
Monopotassium phosphate | Sigma Aldrich | Cat#60229; CAS: 7778-77-0 |
L-ascorbic acid | Sigma Aldrich | Cat#A92902; CAS: 50-81-7 |
Perchloric acid 70% | Sigma Aldrich | Cat#244252 ; CAS : 7601-90-3 |
Hexane | ThermoFisher Scientific | CAS: 110-54-3 |
Methyl acetate | Sigma Aldrich | CAS: 79-20-9 |
Acetonitrile | Sigma Aldrich | CAS: 75-05-8 |
Software and algorithms | ||
TSQ Tune 2.6 SP1 QuickQuan™ Software | ThermoFisher Scientific | Catalog number: IQLAAEGABSFAHQMAPT; https://www.thermofisher.com/order/catalog/product/IQLAAEGABSFAHQMAPT |
Xcalibur 4.0 QF2 software | ThermoFisher Scientific | Catalog number: OPTON-30965; https://www.thermofisher.com/order/catalog/product/OPTON-30965 |
LcmsExplorer | EPFL Lausanne Switzerland | http://lipidomes.epfl.ch/ |
Lipid Data Analyzer | IGB-TUG Graz University | LDA v. 2.6.3.9; https://www.lipidmaps.org/resources/tools/10?task=4.5 |
MetaboAnalyst 5.0. | McGill University, Canada | https://www.metaboanalyst.ca/MetaboAnalyst/ModuleView.xhtml |
Prism Graph Pad 8.0. | Graphpad | https://www.graphpad.com/ |
Other | ||
Precellys 24 tissue homogenizer | Bertin Instruments | https://www.bertin-instruments.com/product/sample-preparation-homogenizers/precellys24-tissue-homogenizer/precellys24-4/ |
Zirconium oxide beads CK14 | Labgene Scientific SA | Cat#BER20305 |