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. 2024 Aug 26;27(9):110820. doi: 10.1016/j.isci.2024.110820
REAGENT or RESOURCE SOURCE IDENTIFIER
Biological samples

Serum and adipose tissue samples from morbid obese subjects before and after GBS intervention University Hospital of Geneva (Montecucco et al., 2015)14 Geneva ethical commission approval number 2017-00133.
Serum and VAT samples from morbid obese non T2D individuals (cohort 2) Université Clermont Auvergne, France (Hannich et al., 2020)9 French Ethical Committee SUD EST IV (Agreement 12/111

Chemicals, peptides, and recombinant proteins

PC 12:0/12:0 Avanti Polar Lipids Inc. Cat#850335; CAS:
18194-25-7
PE 17:0/14:1 Avanti Polar Lipids Inc. Cat#LM-1104; CAS:
958763-89-8
PI 17:0/14:1 Avanti Polar Lipids Inc. Cat#LM-1504; CAS:
1246304-61-9
PS 17:0/14:1 Avanti Polar Lipids Inc. Cat#LM-1304; CAS:
1036814-91-1
Cer d18:1/17:0 Avanti Polar Lipids Inc. Cat#860517; CAS: 67492-16-4
SM d18:1/12:0 Avanti Polar Lipids Inc. Cat#860583; CAS: 474923-21-2
HexCer d18:1/8:0 Avanti Polar Lipids Inc. Cat#860540; CAS: 111956-47-9
MTBE (methyl-tert-butyl ether) Sigma Aldrich Cat#34875; CAS : 1634-04-4
Methylamine solution(33% in absolute ethanol) Sigma Aldrich Cat#534102; CAS: 74-89-5
Chloroform Acros Organics Cat#326820010; CAS: 67-66-3
Methanol Acros Organics Cat#CAS: 67-56-1
n-butanol Acros Organics Cat#CAS: 71363
Ammonium molybdate(VI) tetrahydrate Acros Organics Cat#CAS: 12054-85-2
Monopotassium phosphate Sigma Aldrich Cat#60229; CAS: 7778-77-0
L-ascorbic acid Sigma Aldrich Cat#A92902; CAS: 50-81-7
Perchloric acid 70% Sigma Aldrich Cat#244252 ; CAS : 7601-90-3
Hexane ThermoFisher Scientific CAS: 110-54-3
Methyl acetate Sigma Aldrich CAS: 79-20-9
Acetonitrile Sigma Aldrich CAS: 75-05-8

Software and algorithms

TSQ Tune 2.6 SP1 QuickQuan™ Software ThermoFisher Scientific Catalog number: IQLAAEGABSFAHQMAPT; https://www.thermofisher.com/order/catalog/product/IQLAAEGABSFAHQMAPT
Xcalibur 4.0 QF2 software ThermoFisher Scientific Catalog number: OPTON-30965; https://www.thermofisher.com/order/catalog/product/OPTON-30965
LcmsExplorer EPFL Lausanne Switzerland http://lipidomes.epfl.ch/
Lipid Data Analyzer IGB-TUG Graz University LDA v. 2.6.3.9; https://www.lipidmaps.org/resources/tools/10?task=4.5
MetaboAnalyst 5.0. McGill University, Canada https://www.metaboanalyst.ca/MetaboAnalyst/ModuleView.xhtml
Prism Graph Pad 8.0. Graphpad https://www.graphpad.com/

Other

Precellys 24 tissue homogenizer Bertin Instruments https://www.bertin-instruments.com/product/sample-preparation-homogenizers/precellys24-tissue-homogenizer/precellys24-4/
Zirconium oxide beads CK14 Labgene Scientific SA Cat#BER20305