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. Author manuscript; available in PMC: 2024 Sep 19.
Published in final edited form as: J Bioinform Syst Biol. 2023 Apr 4;6(2):74–81. doi: 10.26502/jbsb.5107050

Figure 3:

Figure 3:

Alignment strategy. (A) Decompose RNA-seq reads and reference into k-mers. (B) Identify novel k-mers from tumor samples compared to normal samples and reference. (C) Partition reads containing novel k-mers into clusters and assemble into contigs. (D) Align against the genomic reference.