Table 7.
SNVs in Kadaknath as per the reference genome Cross of Broiler mother x White Leghorn layer father (GRCg7b).
| Position as per (GRCg7b) | Reference Allele |
Alternate Allele |
Variation Type | Consequence | Gene Symbol |
Location | Feature Sequence |
|---|---|---|---|---|---|---|---|
| 1777551 | G | A | SNP | 3′ UTR variant | chIFITM1 | EXON 1 | ERR7564039.23466 |
| 1777587 | A | G | EXON 1 | ERR7564039.23466 | |||
| 1777972 | A | G | 5′ UTR variant | EXON 1 | ERR7564023.10394 | ||
| 1778830 | A | G | chIFITM2 | EXON 1 | NM_001350058.1 | ||
| 1779054 | NNNNNNN | TTTTTTT | MNP | EXON 1 | NM_001350058.1 | ||
| 1779409 | A | AC | INS | Intron variant | INTRON 1 | NM_001350058.1 | |
| 1780160 | A | G | SNP | Intron variant | INTRON 1 | ERR7564035.14760 | |
| 1781267 | C | T | SNP | 5′ UTR variant | chIFITM5 | EXON 1 | NM_001199498.1 |
| 1781282 | G | A | EXON 1 | NM_001199498.1 | |||
| 1781411 | A | G | EXON 1 | NM_001199498.1 |