Table 1.
Data sets used in this study.
| Data set | Data type | Number of samples | Reference (PMID or link to the datasets) | ||
|---|---|---|---|---|---|
| Total | NEPC | Non-NEPCa | |||
| WCM_NEPC_2016 [6] | Bulk RNA-seq | 49 | 15 | 34 | PMID: 26855148 |
| PRAD_SU2C_2019 [14] | Bulk RNA-seq | 232 | 22 | 210 | PMID: 31061129 |
| GSE32967 [15] | Microarray | 22 | 14 | 8 | PMID: 22156612 |
| GSE149091 [16,17] | Bulk RNA-seq | 4 | 1 | 3 | PMID: 32531951, PMID: 32512818 |
| GSE59984 [18] | Microarray | 14 | 2 | 12 | PMID: 29757368 |
| PRAD_TCGA | Bulk RNA-seq | 498 | 0 | 498 | https://www.cancer.gov/tcga |
| Asberry et al. 2022 [19] | scRNA-seq | 4 | 3 | 1 | PMID: 36382181 |
| Dong et al. 2020 [20] | scRNA-seq | 5 | 4 | 1 | PMID: 33328604 |
a
Non-NEPC represents PCa samples collected in studies that were not recognized as NEPC.