Table 4.

Rediscovering potential binding-site modules from several expression data sets

Binding-site combination
PAC AND mRRPE
MCM1′ AND RAP1 AND SWI5
MCM1′ AND PAC AND mRRPE
LYS14 AND PAC AND mRRPE
MCM1′ AND RAP1
The table shows binding-site combinations found in five of six gene expression data sets (no combination was found in all six data sets). Frequently occurring binding sites in combinations found in several expression data sets are PAC (polymerase A and C-box), mRRPE (ribosomal RNA processing element), and RAP1 (repressor activator protein). These binding sites were much less frequent in combinations found in one or two expression data sets. An extension of the table listing all combinations and the information from which expression data sets they were induced may be found at our Web site.