Table 2.
Coverage of the Pfam database
Number of genomes | Mean coverage (%) | Highest coverage (%) | Lowest coverage (%) | |
---|---|---|---|---|
Eukaryota | 17 | 64 | 75 Arabidopsis thaliana | 49 Plasmodium falciparum |
Bacteria | 157 | 76 | 96 Buchnera apidicola | 44 Rhodospirellula baltica |
Archae | 19 | 66 | 79 Pyrococcus abyssi | 40 Aeropyrum pernix |
The coverage of a complete proteome is the number of its proteins (in percent) that contain one or more Pfam domain(s). The data have been extracted from the Pfam Web site (December 2004).