Table 4.
List of 26 significantly differentially expressed genes in Kpn5 VS Kpn7 and Kpn11 VS Kpn16.
| Gene Id | MeanTPM (Kpn5/Kpn7) | MeanTPM (Kpn11/Kpn16) | Result | Log2FoldChange | Gene description |
|---|---|---|---|---|---|
| KPHS_43430 | 1.87/72.58 | 1.5/87.51 | Down | −5.3/−5.9 | Putative fimbrial-like protein |
| KPHS_43440 | 0.21/136.92 | 0.34/164.2 | Down | −9.3/−8.9 | Putative fimbrial-like protein |
| KPHS_43450 | 0.39/115.66 | 0.48/135 | Down | −8.2/−8.1 | Putative fimbrial usher protein |
| KPHS_43460 | 0.0001/86.42 | 0.0001/116.81 | Down | −19.7/−20.1 | MrkB fimbrial protein |
| KPHS_43470 | 0.0001/1383.18 | 0.86/1622.43 | Down | −23.7/−10.9 | MrkA fimbrial protein |
| KPHS_43480 | 0.0001/15.31 | 0.0001/38.12 | Down | −17.2/−18.5 | Hypothetical protein |
| KPHS_43490 | 0.0001/0.4 | 0.0001/0.31 | Down | −11.9/−11.6 | EamA family transporter |
| KPHS_43500 | 0.0001/12.61 | 0.0001/16.53 | Down | −16.9/−17.3 | Putative regulatory protein MarR |
| KPHS_43510 | 0.0001/0.86 | 0.0001/1.57 | Down | −13.1/−13.9 | Nickel/cobalt transporter |
| KPHS_43550 | 338.41/3.97 | 639.63/3.09 | Up | 6.4/7.69 | Major type 1 subunit fimbrin (pilin) |
| KPHS_43560 | 27.4/0.53 | 65.83/0.35 | Up | 5.7/7.6 | Fimbrial protein involved in type 1 pilus biosynthesis |
| KPHS_43570 | 23.96/0.2 | 25.75/0.46 | Up | 6.9/5.8 | Periplasmic chaperone |
| KPHS_43580 | 9.36/0.69 | 17.01/0.71 | Up | 3.8/4.6 | Outer membrane protein for export and assembly of type 1 fimbriae |
| KPHS_43590 | 25.75/1.69 | 40.39/3.12 | Up | 3.9/3.7 | Type 1 fimbrial minor component |
| KPHS_43600 | 11.82/1.03 | 28.91/2.42 | Up | 3.5/3.6 | Fimbrial morphology protein |
| KPHS_43610 | 14.34/1.61 | 28.08/2.07 | Up | 3.2/3.2 | Fimbrial protein FimH |
| KPHS_43620 | 3.76/0.81 | 10.34/1.36 | Up | 2.2/2.9 | Putative fimbrial protein |
| KPHS_47790 | 6.35/0.91 | 3.02/1.02 | Up | 2.8/1.6 | Hypothetical protein |
| KPHS_35550 | 56.19/7.41 | 42.15/3.9 | Up | 2.9/3.4 | dTDP-4-dehydrorhamnose 3,5-epimerase |
| KPHS_33690 | 40.52/6.7 | 13/4.17 | Up | 2.6/1.6 | Hypothetical protein |
| KPHS_12940 | 9.41/1.51 | 4.29/1.41 | Up | 2.6/1.6 | Hypothetical protein |
| KPHS_04400 | 30.47/2.2 | 5.14/2.39 | Up | 3.8/1.1 | Hypothetical protein |
| KPHS_35580 | 47.58/11.78 | 36.66/7.91 | Up | 2.0/2.2 | dTDP-D-glucose 4,6-dehydratase |
| KPHS_35570 | 46.72/11.01 | 41.52/7.15 | Up | 2.1/2.5 | Glucose-1-phosphate thymidylyltransferase |
| KPHS_31660 | 40.98/9.19 | 29.51/11.04 | Up | 2.2/1.4 | Putative translation initiation inhibitor |
| KPHS_17580 | 17.19/3.82 | 29.47/11.84 | Up | 2.2/1.3 | Oxygen-insensitive NADPH nitroreductase |