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. 2024 Sep 2;14(9):1103. doi: 10.3390/life14091103
3D three-dimensional
adj. p adjusted p-value
ARVO Association for Research in Vision and Ophthalmology
BPM bins per million mapped reads
CAR cone arrestin
Clm clomeleon
Cplx complexin
CrxpNrl Crx promoter
DAPI 4′,6-diamidino-2-phenylindole
DEGs differentially expressed genes
Dlg4 discs large MAGUK scaffold protein 4
Dmd dystrophin muscular dystrophy
downSCL down-regulated genes in developing S-cone-like photoreceptors
KEGG Kyoto Encyclopedia of Genes and Genomes
GEO Gene Expression Omnibus
GFP green fluorescent protein
Gnb G protein subunit beta
GO Gene Ontology
Goα guanine nucleotide-binding protein alpha subunit
Nr2E3 nuclear receptor subfamily 2 group E member 3
NRL neural retina leucine zipper
Nrlp-EGFP Nrl promoter-driven enhanced GFP
Nrlp-GFP Nrl promoter-driven GFP
OCT optimal cutting temperature
OPL outer plexiform layer
P postnatal day
PFA paraformaldehyde
PKCα Protein Kinase C alpha
PNA peanut agglutin lectin
PSD-95 postsynaptic density protein 95
pUB Ubiquitin C promoter
S-opsinp-tdT S opsin promoter-driven tdTomato
SCL S-cone like
shRNA short hairpin ribonucleic acid
Sv Synaptic vesicle glycoprotein
SynGO Synaptic Gene Ontologies and annotations
TPM transcript per million
upRod-NRL upregulated NRL binding genes in developing WT rods
upSCL-NRL upregulated NRL binding genes in developing S-cone-like photoreceptors
vs. versus
WT Wild-type