Table 2.
DAVID analysis of SCL-upregulated NRL targets. This table displays relevant Gene Ontology (GO) terms and genes that could be associated with synapse development.
| GOterm | Go ID | Genes |
|---|---|---|
| actin binding | 0003779 | DIAPH3, PARVG, WIPF1, EPB41L1, MYO7A, CAP2 |
| dendrite | 0030425 | ACHE, OPN4, NEGR1, NR1D1, IGSF9, CNNM4 |
| actin cytoskeleton | 0015629 | RINL, PARVG, WIPF1, MYO7A |
| cell morphogenesis | 0000902 | GREM1, GNAT2, CAP2 |
| ATP-dependent microtubule motor activity, minus-end-directed | 0008569 | KIFC1, DNAH7C |
| axon | 0030424 | ACHE, OPN4, MAP4, IGSF9, DCLK1 |
| amino acid transmembrane transport | 0003333 | SLC7A8, SLC38A3 |
| microtubule | 0005874 | KIFC1, MAP4, DNAH7C |
| calcium ion binding | 0005509 | HEG1, CALU, SPOCK1, AMY1, DNAH7C |
| extracellular region | 0005576 | GREM1, ACHE, ORM1, CALU, SPOCK1, AMY1 |
25 genes: ACHE, AMY1, CALU, CAP2, CNNM4, DCLK1, DIAPH3, DNAH7C, EPB41L1, GNAT2, GREM1, HEG1, IGSF9, KIFC1, MAP4, MYO7A, NEGR1, NEGR1, OPN4, ORM1, PARVG, RINL, SLC38A3, SLC7A8, SPOCK1, WIPF1. SynGO analyses also provided genes underlined.