Table 1.
SNPs that significantly correlated with leaf salt injury index.
| SNP-ID | Position (IWGSC v1.0) | p Value | Gene | Module | Annotation |
|---|---|---|---|---|---|
| 1B28382[G/C] | chr1B:357643623 | 6.16 × 10−5 | TraesCS1B02G199700 | Turquoise | Aldo/keto reductase |
| 1B28384[T/C] | chr1B:357643624 | 6.16 × 10−5 | |||
| 1B62422[G/A] | chr1B:658447582 | 9.44 × 10−5 | TraesCS1B02G433700 | Red | B12D protein |
| 2A19680[C/T] | chr2A:202051233 | 8.23 × 10−5 | TraesCS2A02G215100 | Turquoise | β-amylase |
| 2A56718[T/C] | chr2A:735005679 | 1.18 × 10−5 | TraesCS2A02G508900 | Magenta | 3-phosphoglycerate dehydrogenase |
| 2A56735[C/G] | chr2A:735005886 | 1.18 × 10−5 | |||
| 2A56900[C/T] | chr2A:735008442 | 3.74 × 10−5 | |||
| 2A57026[T/C] | chr2A:735010697 | 7.21 × 10−5 | |||
| 2A57040[C/T] | chr2A:735010824 | 3.20 × 10−6 | |||
| 2A57350[C/T] | chr2A:735247227 | 2.77 × 10−6 | TraesCS2A02G509600 | Purple | Kinase |
| 2B36776[G/A] | chr2B:394319058 | 2.21 × 10−5 | TraesCS2B02G286300 | Yellow | Senescence regulator S40 |
| 2B53697[G/A] | chr2B:583672455 | 6.16 × 10−5 | TraesCS2B02G410100 | Blue | Pentatricopeptide repeat-containing protein |
| 2D16208[G/A] | chr2D:30979221 | 5.59 × 10−5 | TraesCS2D02G073700 | Brown | Germin-like protein |
| 2D16220[C/G] | chr2D:30979584 | 1.13 × 10−5 | |||
| 2D30145[T/C] | chr2D:112552049 | 9.02 × 10−5 | TraesCS2D02G168600 | Black | Transcription factor WRKY |
| 3A25691[A/G] | chr3A:418765923 | 2.19 × 10−5 | TraesCS3A02G223700 | Brown | Chitinase domain-containing protein 1 |
| 3A25693[G/A] | chr3A:418765932 | 2.19 × 10−5 | |||
| 3A25695[C/A] | chr3A:418765937 | 2.19 × 10−5 | |||
| 3A25696[T/C] | chr3A:418765938 | 2.19 × 10−5 | |||
| 3D34988[A/G] | chr3D:569527094 | 6.89 × 10−5 | TraesCS3D02G465600 | Yellow | Hydroxyethylthiazole kinase |
| 5B14295[C/T] | chr5B:381844970 | 8.23 × 10−5 | TraesCS5B02G211000 | Yellow | Jasmonate zim-domain protein |
| 6B00507[C/T] | chr6B:18731508 | 1.25 × 10−5 | TraesCS6B02G031700 | Yellow | Acid β-fructofuranosidase |
| 6B00509[G/A] | chr6B:18731516 | 1.25 × 10−5 | |||
| 7B00634[A/C] | chr7B:23439766 | 5.42 × 10−5 | TraesCS7B02G024500 | Red | Glutamyl-tRNA reductase |
| 7B00635[A/C] | chr7B:23439791 | 3.77 × 10−5 | |||
| 7B00636[G/C] | chr7B:23439798 | 3.77 × 10−5 | |||
| 7B00758[C/T] | chr7B:23442344 | 9.84 × 10−5 | |||
| 7D14857[T/C] | chr7D:141558991 | 2.17 × 10−5 | TraesCS7D02G189000 | Turquoise | Amino acid permease |
| 7D14966[T/A] | chr7D:141564019 | 7.20 × 10−5 | |||
| 7D14967[C/A] | chr7D:141564020 | 7.20 × 10−5 |