TABLE 1.
Huh-7.5 peptides and proteins identified
| Peptide or protein | Total HCV− | Total HCV+ | Overlap, HCV+, HCV− | Total no. of unique peptides or proteins |
|---|---|---|---|---|
| Total peptidesa | 16,853 | 15,511 | 7,694 | 24,670 |
| Virus peptidesb | 0 | 43 | 0 | 43 |
| Virus proteinsc | 0 | 7 | 0 | 7 |
| Total proteinsd | 3,406 | 3,160 | 2,352 | 4,214 |
a
The total number of peptides detected in Huh-7.5 cells negative or positive for the HCV replicon. A total of 7,694 peptides were detected in both samples, thus resulting in a total of 24,670 unique peptides detected in the entire study.
b,c
A total of 43 viral peptides, corresponding to seven HCV proteins, were detected only in Huh-7.5 cells transfected with the HCV replicon.
d
The total number of proteins identified from the peptides detected in Huh-7.5 cells negative or positive for the HCV replicon. A total of 2,352 proteins were detected in both samples, thus resulting in a total of 4,214 unique proteins detected in the entire study.