Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2024 Sep 27;15:8386. doi: 10.1038/s41467-024-52427-x

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Fig. 1 — a Samples were taken at (on average) weekly intervals between 2020 and 2022 from 34 sites within Miami-Dade County. Samples were sequenced with targeted ARTIC sequencing to measure SARS-CoV-2 abundance and bulk RNA sequencing to ascertain the broader microbial community. A variety of algorithms and analytic approaches were employed to identify and compare the taxonomic and functional profiles of each site across time and space, with the end result being a systematically characterized dataset with comparisons to clinical data to provide information relevant to public health surveillance showing the evolution of variants over space and time. b The monthly VoC proportions across datasets. Point color corresponds to the month. X-axis is the proportion of samples annotated as a given VoC for patient or student samples (derived from individual tests). Y-axis is the average variant abundance in targeted wastewater sequencing. c An additional, density-plot-based, view of all variants in wastewater vs patient/student cohorts over time. Colors correspond to different variants as defined in the legend between (c) and (d); this legend is relevant to both panels. d The variation in wastewater VoCs across time in different sampling sites. Source data are provided as a Source Data file. a created with BioRender.com released under a CC-BY-NC-ND 4.0 International license.