Table 4.
Genotypes of genomic DNA and nine sperm aliquots at five SNP loci determined by sequencing
| SNP ID | Contigs | Position in contigs | Genomic DNA | S01 | S04 | S05 | S06 | S08 | S13 | S14 | S15 | S16 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs6129731 | NT_011362.9 | 4713602 | A/C | ? | A | A | A | C | A | C | A | C |
| rs2235362 | NT_011362.9 | 4797334 | A/C | C | ? | A | A | C | A | C | A | C |
| rs6102287 | NT_011362.9 | 4797565 | A/G | G | ? | A | A | G | A | G | A | G |
| rs1048943 | NT_010194.16 | 45803303 | T/C | C | C | T | C/t | T | C | T | ? | C |
| rs17861120 | NT_010194.16 | 45817497 | A/G | G | G | A | A/g | A | G | A | G | G |
? indicates no PCR amplification, and the italic small letter indicates the allele with amplification of much lower efficiency.