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. 2024 Sep 13;16(9):1460. doi: 10.3390/v16091460

Figure 6.

Figure 6

Multiple sequence alignments of the CVR region for genotype II sequences. (A) On the top of the alignment, the consensus sequence called from our samples and one representative for each known variant is represented. The translated CVR region has characteristic amino acid tetramer repeats, including some single nucleotide polymorphisms (colored amino acids), and in one variant (CVR2) a deletion of three amino acid tetramers (MT647527). All our samples belong to the variant CVR1, like the Georgia 2007 strain (FR682468). The other known CVR1 variants for genotype II ASFV are also aligned: CVR1-SNP1 (MT647567), CVR1-SNP2 (OQ031066), CVR1-SNP3 (OQ031067), and CVR1-SNP4 (OQ675553). (B) The nucleotide sequences of the same amplicon were also aligned, where all the samples sequenced in this study align without mismatches to the Georgia 2007 strain (FR682468).