TABLE 2.
Microbial detections in samples used for transcriptomic profiling
| Group | Microbial detection(s) | ||||
|---|---|---|---|---|---|
| Bacterial | Haemophilus influenzae | Mycoplasma pneumoniae | H. influenzae/Streptococcus pneumoniae | Staphylococcus aureus/Escherichia coli/Klebsiella oxytoca | H. influenzae/Moraxella catarrhalis/E. coli |
| Patients (n=) | 3 | 2 | 1 | 1 | 1 |
| Viral | Influenza A virus | Human metapneumovirus | Influenza A virus/respiratory syncytial virus | Coronavirus other than SARS-CoV-2 | |
| Patients (n=) | 3 | 3 | 1 | 1 | |
| COVID-19 | SARS-CoV-2 | ||||
| Patients (n=) | 8 | ||||