Skip to main content
. 2024 Sep 12;12(10):e03432-23. doi: 10.1128/spectrum.03432-23

Fig 4.

Two plots compare the HPIV1/CHN/YC/17073/2017 sequence with references: a BootScan depicting permuted tree percentages and a SimPlot displaying genome similarity across positions.

Similarity and bootscaning analyses for complete CDS region of HPIV1 strain. Similarity plot (A) and bootscanning analysis (B) were performed using the full-length genome sequences of prototype strain HPIV1/USA Washington/1964 (GenBank accession: AF457102), grouped strains belonged to clade A, the potential major parent (HPIV1/China_Beijing/BCH20170252/2017) and the putative minor parent (HPIV1/China_Nixiang/YC17091/2017). A sliding window of 1,000 nucleotides (nt) moving in 200 nt step was used in this analysis.