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[Preprint]. 2024 Aug 21:2024.08.20.608894. [Version 1] doi: 10.1101/2024.08.20.608894

Table 2: Data Descriptions Used for the Machine Learning Study.

This table enlists all the datasets used during the responder/non-responder prediction across different cancer types.

Sr. No Cancer Type Treatment Platform Dataset Link Reference
1 BRCA Neoadjuvant
Doxorubicin/Cyclophosphamide followed by Ixabepilone or Paclitaxel
Microarray GSE41998 Horak et.al. [40]
Neoadjuvant taxane-based chemotherapy RNA Sequencing GSE163882 Chen et.al. [41]
Chemotherapy followed by Trastuzumab Microarray GSE66399 Dinstag et.al. [42]
Chemotherapy followed by Trastuzumab Microarray GSE37946 Dinstag et.al [42]
Neoadjuvant fluorouracil/epirubicin/cyclophosp hamide followed by Trastuzumab Microarray GSE42822 Dinstag et.al [42]
Neoadjuvant platinum & Bevacizumab Microarray GSE103668 Dinstag et.al [42]
Alpelisib Dinstag et.al [42]
Chemotherapy followed by Lapatinib Microarray GSE66399 Dinstag et.al [42]
Neoadjuvant Herceptin followed by Trastuzumab Microarray GSE50948 Dinstag et.al [42]
Durvalumab with Olaparib Microarray GSE173839 Dinstag et.al [42]
2 COAD FOLFOX Therapy Microarray GSE28702 Tsuji et.al. [43]
FOLFIRI Therapy Microarray GSE62080 Rio et.al. [44]
3 LIHC Sorafenib as standard systemic therapy RNA Sequencing GSE109211 Pinyol et.al. [45]
4 ESCA Preoperative chemoradiotherapy followed by surgery Microarray GSE45670 Wen et.al. [46]