TABLE 1.
Clonea | TCR | Sequenceb
|
J |
---|---|---|---|
VN/Junctional region | |||
Alpha region | |||
TP 35 | TCRAV1S1 | Y F C A T V R D G N N T D K L I F G T G T R Q V F P | 34 |
TP 33, 80 | TCRAV2 | Y Y C A V A H N Y G Q N F V F G P G T R L S V L | 26 |
TP 21 | TCRAV3S1 | Y F C A V E Q R M V A D K L I F G T G T R L Q V F P | 34 |
TP 20, 32, 41, 58, 63 | TCRAV4S1 | Y Y Y C I R S G S A R Q L T F G S G T Q L T V L P | 22 |
TP 43 | TCRAV12S2 | Y L C A V D S G G Y Q K V T F G I G T K L Q V I P | 13 |
TP 79 | TCRAV12S2 | Y L C A V N I G F G N V L H C G S G T Q V I V L P | 35 |
TP 27 | TCRAV12S2 | Y L C A V N P P F G N E K L T F G T G T R L T I I P | 48 |
TP 7 | TCRAV14S1 | Y F C A M M G G G S E K L V F G K G T K L T V N P Y | 57 |
TP 40 | TCRAV14S1 | Y F C A W D N A G N M L T F G G G T R L M V K P H | 39 |
TP 26, 45 | TCRAV14S1 | Y F C A Y L N T G N Q F Y F G T G T S L T V I P | 49 |
TP 60 | TCRAV14S1 | Y F C A Y R T L Y D N F G N E K L T F G T G T R L T I I P | 48 |
TP 61 | TCRAV15S1 | Y I C A V K E S L V E M R K L T F G T G T R L L T I I P | 48 |
TP 34 | TCRAV17S1 | Y F C A C F Q G A Q K L V F G Q G T R L T I N P | 54 |
TP 20, 32, 41, 58, 63, 61, 71, 72, 73, 10, 59 | TCRAV17S1 | Y F C A A F Q G A Q K L V F G Q G T R L T I N P | 54 |
Beta region | |||
TP 45 | TCRBV7 | Y L C A S S Q E R L S F G T K N I Q Y F G A G T R L S V L | 2.4 |
TP 79 | TCRBV8 | Y F C A S S S E Y R S G A N V L T F G A G S R L T V L | 2.6 |
TP 26, 60 | TCRBV8 | Y F C A S S K P S V M N T E A F F G Q G T R L T V V | 1.1 |
TP 20, 32, 41, 58, 63 (I) | TCRBV13S1 | Y F C A S S V P G A G E E T Q Y F G P G T R L L V L | 2.5 |
TP10, 73 (II) | TCRBV13S1 | Y F C A S S S P G Q G N Y E Q Y F G P G T R L T V T | 2.7 |
TP 34 (III) | TCRBV13S1 | Y F C A S S T P G Q G A Y E Q Y F G P G T R L T V T | 2.7 |
TP 61 (IV) | TCRBV13S1 | Y F C A S S Y P G Q G E H E Q Y F G P G T R L T V T | 2.7 |
TP 59, 71, 72 (V) | TCRBV13S1 | Y F C A S S S P G T G V N E Q F F G P G T R L T V L | 2.1 |
TP 43 | TCRBV13S1 | Y F C A S S K P G L G G T G E L F F G E G S R L T V L | 2.1 |
TP 48 | TCRBV13S1 | Y F C A S S R P G L A G R N E Q F F G P G T R L T V L | 2.1 |
TP 27 | TCRBV16S1 | Y F C A S Q L G Q G V H G Y G Y T F G S G T R L T I V | 1.2 |
TP 33, 80 | TCRBV16S1 | Y F C A S Q D F L S S G A Y N E Q F F G P G T R L T V L | 2.1 |
TP 7 | TCRBV21S1 | Y L C A S S L T I G G A Q F F G Q G T R L T V V | 1.1 |
TP 21 | TCRBV21S1 | Y L C A S S F M T D T Q Y F G P G T R L T V L | 2.3 |
TP 35 | TCRBV21S1 | Y L C A S S L P D T Q Y F G P G T R L T V L | 2.3 |
TP 40 | TCRAV17S1 | Y L C A S S A R L G Q P Q H F G D G T R L S I L | 1.5 |
T-cell clones expressing TCRBV13S1 were divided into groups (I to Y, indicated in parentheses) depending on the CDR3 region sequence.
N or N(D)J additions for both alpha and beta chains are indicated in bold.