(A) Fragment of the structural model of the tripartite complex showing interaction between K132 and K172 of Hsc20’s CTD and D364 of Ssq1’s NBD- the novel interaction site.
(B) Kinetics of relative deuterium uptake into the D364-containing Ssq1* peptide (354-369). Ssq1* alone (green); tripartite complex (black). (C) (top) Isu1GST (2.5 μM) was incubated with Ssq1* (5 μM) and Hsc20 WT or K132A, K172A or double K132A/K172A (KK) variants (2.5 μM). Glutathione resin was added to pull-down GST and associated proteins, which were then separated by SDS-PAGE and stained with Coomassie blue; entire gel, loading controls and quantification in Figure S12. Molecular weight markers in kDa on left ★ - marks the Isu1GST degradation product. (bottom) Amounts of Ssq1* pulled down were quantified by densitometry and corrected for background binding to GST alone; Ssq1* levels for Isu1GST interacting with Hsc20 and Ssq1* were set at 100%. Error bars represent SD. (D) BLI analysis of Isu1GST interaction with Ssq1* and Hsc20 variants defective in the novel Hsc20-Ssq1 interaction. Association-1, BLI sensors loaded with Isu1GST were placed in solution containing Hsc20 WT or variants K132A, K172A or double K132A/K172A (KK) (1 μM); association-2, the sensors were placed in solution containing Ssq1* (1 μM) and Hsc20 WT or variant (1 μM). Dissociation, the sensors were placed in solution without proteins.
(E) Sequence conservation of Hsc20 and Hsp70 positions involved in the novel Hsc20-Ssq1 interaction in S. cerevisiae across fungi post-duplication species (green branches) in which Hsc20 functions with Ssq1 and non-duplication species (black branches) in which Hsc20 functions with mtHsp70. Star indicates emergence of Ssq1 as result of mtHsp70 gene duplication.