Table 1.
Experimental structures of integrin αVβ3 available in the Protein Data Bank
| PDB ID | Method | Resolution (Å) | Year (PDB) | Ligand details | Ref. | |||
|---|---|---|---|---|---|---|---|---|
| Name | Metal | Selectivity for αVβ3 | Activity | |||||
| 1JV2 | X-ray | 3.10 | 2001 | - | Ca2+ | 42 | ||
| 1L5G | X-ray | 3.20 | 2002 | Cyclic RGD peptide (Cilengitide) | Mn2+ | Non-selective | Partial agonist | 36 |
| 1M1X | X-ray | 3.30 | 2002 | - | Mn2+ | 36 | ||
| 1U8C | X-ray | 3.10 | 2004 | - | Ca2+ | 43 | ||
| 3IJE | X-ray | 2.90 | 2009 | - | Ca2+ | 44 | ||
| 4G1E | X-ray | 3.00 | 2012 | - | Ca2+ | 45 | ||
| 4G1M | X-ray | 2.90 | 2012 | - | Ca2+ | 45 | ||
| 4MMX | X-ray | 3.32 | 2013 | The tenth domain of fibronectin (wtFn10) | Mn2+ | Selective | Agonist | 34 |
| 4MMY | X-ray | 3.18 | 2013 | Fibronectin peptide (IAKGDWND motif) | Mn2+ | Selective | Partial agonist | 34 |
| 4MMZ | X-ray | 3.10 | 2013 | The antagonistic tenth domain of Fibronectin (hFn10) | Mn2+ | Selective | Antagonist | 34 |
| 4O02 | X-ray | 3.60 | 2013 | αV-specific antibody (17E6). | Mn2+ | Non-selective | Antagonist | 40 |
| 6AVQ | Cryo-EM | 35.00 | 2017 | αVβ3 monoclonal antibody (LM609) | - | Selective | Antagonist | 41 |
| 6AVR | Cryo-EM | 35.00 | 2017 | αVβ3 monoclonal antibody (LM609) | - | Selective | Antagonist | 41 |
| 6AVU | Cryo-EM | 35.00 | 2017 | αVβ3 monoclonal antibody (LM609) | - | Selective | Antagonist | 41 |
| 6MK0 | X-ray | 3.00 | 2019 | Inhibitor TDI-4161 | Mn2+ | Selective | Antagonist | 37 |
| 6MSL | X-ray | 3.10 | 2019 | Knottin EETI-II 2.5D | Mn2+ | Selective | Partial agonist | 39 |
| 6MSU | X-ray | 3.11 | 2019 | Knottin EETI-II 2.5F | Mn2+ | Non-selective | Partial agonist | 39 |
| 6NAJ | X-ray | 3.10 | 2019 | Hr10 variant of 10th domain of fibronectin | Mn2+ | Antagonist | 38 | |