Figure 1.

Curation of NephroDIP manuscripts from 5 PubMed searches including transcriptomic, proteomic, metabolomic, epigenomic, and single nucleotide variant (SNV) human kidney transplant studies. Excluded article numbers and the reasons for exclusion are listed along with the final number of studies and comparisons included for each search term. Articles included in NephroDIP v1.0 were those that used high throughput methodology in a cohort of kidney transplant patients, had original data, were written in English, used either p- or q-values as measures of significance, used fold change to see differences between groups of interest (hazard ratios, odds ratios, or effect size were used for SNV studies), and had accessible and downloadable tables that described the comparison between groups.