Table 1.
T-cell epitope associated databasesa.
| # | Name | Scope | Approximate size | Link | Ref. |
|---|---|---|---|---|---|
| 1 | IEDB-3D 2.0 | Structural T-cell & B-cell epitopes | 410 assays (T-cell) 1,446 assays (MHC binding) |
https://www.iedb.org/ | (81) |
| 2 | HIV molecular immunology database | HIV-associated T-cell & B-cell epitopes | 13,700 entries (T-cell) |
https://www.hiv.lanl.gov/content/immunology/index.html | (82) |
| 3 | CEDAR | Cancer-associated T-cell & B-cell epitopes | 224,000 entries (B-cell & T-cell) |
https://cedar.iedb.org/ | (23) |
| 4 | IEDB | T- cell & B-cell epitopes | 1,610,000 entries (B-cell & T-cell) | https://www.iedb.org/ | (83) |
| 5 | TANTIGEN 2.0 | Cancer-associated T-cell epitopes | 1,000 entries | http://projects.met-hilab.org/tadb/ | (84) |
| 6 | Protegen | Protective antigens | 1600 entries | https://violinet.org/protegen/ | (85) |
| 7 | FLAVIdBb | Flavivirus associated T-cell & B-cell epitopes | 12,800 entries (B-cell & T-cell) |
http://cvc.dfci.harvard.edu/flavi/ | (86) |
| 8 | MHCBN 4.0 | Peptides associated with TAP and MHC | 25,000 entries | https://webs.iiitd.edu.in/raghava/mhcbn/ | (87) |
| 9 | EPIMHC | MHC-restricted peptide ligands and epitopes | 4800 entries | http://bio.med.ucm.es/epimhc/ | (88) |
| 10 | SYFPEITHI | Peptide binding MHC I or MHC II | 7,000 entries | http://www.syfpeithi.de/ | (89) |
aAccessibility evaluated on 12-06-2024.
bThis database was found to be inaccessible as of 12-06-2024. Its inclusion depends on two factors: links often migrate or are repaired, and these databases have been used in the development of tools in the past. The link provided is the last known link used to access the database.