Table 2.
B-cell epitope associated databasesa.
| # | Name | Scope | Approximate size | Link | Ref. |
|---|---|---|---|---|---|
| 1 | IEDB-3D 2.0 | Structural T-cell & B-cell epitopes | 4,859 assays (B-cell) |
https://www.iedb.org/ | (81) |
| 2 | SDAP 2.0 | Allergen-associated B-cell epitopes | 4,000 entries | https://fermi.utmb.edu/SDAP/sdap_fas.html | (90) |
| 3 | HIV molecular immunology database | HIV-associated T-cell & B-cell epitopes | 4,200 entries (B-cells) |
https://www.hiv.lanl.gov/content/immunology/index.html | (82) |
| 4 | CEDAR | Cancer-associated T-cell & B-cell epitopes | 224,000 entries (B-cell & T-cell) |
https://cedar.iedb.org/ | (23) |
| 5 | IEDB | T-cell & B-cell epitopes | 1,610,000 entries (B-cell & T-cell) |
https://www.iedb.org/ | (83) |
| 6 | FLAVIdBb | Flavivirus-associated T-cell & B-cell epitopes | 12,858 entries (B-cell & T-cell) |
http://cvc.dfci.harvard.edu/flavi/ | (86) |
| 7 | Protegen | Protective antigens | 1600 entries | https://violinet.org/protegen/ | (85) |
| 8 | CEDb | Conformational B-cell epitopes | 225 entries | http://immunet.cn/ced/ | (91) |
| 9 | EPITOMEb | B-cell epitopes | 142 entries | https://www.rostlab.org/services/epitome/submit.php | (92) |
| 10 | BciPep | B-cell epitopes | 3,031 entries | http://crdd.osdd.net/raghava/bcipep/pep_src.html | (28) |
| 11 | AntiJen | T-cell & B-cell epitopes | 24,000 entries (B-cell & T-cell) |
http://www.ddg-pharmfac.net/antijen/AntiJen/antijenhomepage.htm | (93) |
aAccessibility evaluated on 12-06-2024.
bThis database was found to be inaccessible as of 12-06-2024. The choice to include it depended on two factors: links often migrate or get repaired and these databases have been used in the development of tools in the past. The link provided is the last known link used to access the database.