Table 1.
Software used in the workflow.
Software | Purpose | Link |
---|---|---|
ChimeraX | Perform docking preparation of the retrieved proteins (albumin and Keratin-26). | https://www.cgl.ucsf.edu/chimerax/download.html |
EDock | Perform blind protein–ligand docking between each chemical and each retrieved protein. | https://zhanggroup.org/EDock/ |
HDock | Perform protein–protein blind docking between the complexes with the beast docking scores and each TLR. | http://hdock.phys.hust.edu.cn/ |
IEDB | Predict potential epitopes from the complexes with the best docking scores. | https://www.iedb.org/ |
UISS | Simulate Th1/Th2/Th17 response and cytokine panels. | https://combine-group.org/ |