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. 2024 Oct 3;40(10):btae576. doi: 10.1093/bioinformatics/btae576

Table 2.

Pearson correlation between average uncertainty prediction for a region and the corresponding mean RMSD.a

CDRH1 CDRH2 CDRH3 Fw-H CDRL1 CDRL2 CDRL3 Fw-L
ABodyBuilder2 0.41 0.38 0.57 0.50 0.47 0.48 0.72 0.40
ABodyBuilder3 0.58 0.26 0.61 0.48 0.60 0.20 0.68 0.67
ABodyBuilder3-LM 0.69 0.36 0.73 0.39 0.72 0.52 0.68 0.58
a

Uncertainties for ABodyBuilder2 are derived from an ensemble of four models, while all ABodyBuilder3 uncertainties are directly predicted by a pLDDT head.