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. 2024 Sep 30;15:1477458. doi: 10.3389/fmicb.2024.1477458

Table 3.

Genetic clusters associated with secondary metabolite production on the Streptomyces LB8 strain genome.

Region Nucleotide
Type From To Most similar known cluster Similarity Associated function
1 Redox-cofactor 50,214 73,001
2 NAPAA 480,324 514,744 Stenothricin 13% Antibiotic
3 Thiopeptide, LAP, siderophore 1,569,742 1,605,016
4 Lassopeptide 1,807,832 1,830,430 Chaxapeptin 28% Lassopeptides
5 Siderophore 2,000,875 2,011,432 - - -
6 Ectoine 2,108,211 2,118,615 Ectoine 100% Osmotic stress reaction
7 RiPP-like 2,442,726 2,452,532
8 T3PKS 2,458,946 2,500,004 Herboxidiene 5% Antibacterial, antitumor
9 Terpene 3,025,566 3,049,031 Carotenoid 63% Antibiotic (pigment)
10 Butyrolactone 3,558,699 3,567,982 Chondrochloren 50% Antibiotic (latam among others), antitumor, antifungal
11 T2PKS 3,343,401 3,413,785 Mayamycin 72% Antibiotic (macrolides), antitumor
12 Butyrolactone 3,558,699 3,567,892 Neocarzinostatin 6% Antitumor antibiotic
13 Betalactone, siderophore, lanthipeptide-class-i 3,659,619 3,713,166 Desferrioxamine 83% Antifungal, siderophores
14 NRPS-like, butyrolactone 3,714,886 3,756,801 Lactonamycin 5% Antibacterial
15 Lanthipeptide-class-I 4,176,064 4,201,341
16 PKS-like, T1PKS 4,322,763 4,370,474 Arsono-polyketide 75% Polyketide
17 NRPS, NAPAA, terpene 4,773,300 4,816,581 Stenothricin 13% Antibiotic (including lipopeptides)
18 T2PKS 4,960,865 5,033,380 Spore pigment 83% Antibiotic, antitumor, antifungal
19 RiPP-like 5,835,922 5,884,571
20 Butyrolactone 5,472,550 5,483,563 Cyphomycin 6% Antifungal, antiplasmodial
21 PKS-like 5,835,922 5,884,571 Sanglifehrin 6% Antibiotic, antitumor, immunosuppression
22 Terpene 5,889,153 5,909,308 Albaflavenone 100% Antibacterial
23 Terpene 5,925,036 5,951,725 Hopene 53% Antimicrobial and Antitumor

Clusters unmatched with known clusters are denoted with “-.”