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. 2024 Oct 2;15:1455927. doi: 10.3389/fimmu.2024.1455927

Table 2.

Associations between the NUGs of three independent SNPs with NSCLC OS and DSS in the PLCO Trial.

Genotype Frequency OS a DSS a
Death (%) HR (95% CI) P Death (%) HR (95% CI) P
LRRC8C rs10493829 T>C b
 TT 372 257 (60.09) 1.00 229 (61.56) 1.00
 TC 557 377 (67.68) 0.94(0.80-1.10) 0.442 337 (60.50) 0.94 (0.80-1.12) 0.502
 CC 246 155 (63.01) 0.69 (0.56-0.84) 0.0003 143 (58.13) 0.72 (0.58-0.89) 0.003
 Trend test 0.0005 0.0001
Dominant
 TT 372 257 (60.09) 1.00 229 (61.56) 1.00
 TC+CC 803 532 (66.25) 0.85 (0.73-0.99) 0.035 480 (59.78) 0.87 (0.74-1.02) 0.075
Or reverse
 TC+CC 803 532 (66.25) 1.00 480 (59.78) 1.00
TT 372 257 (60.09) 1.18 (1.01-1.37) 0.035 229 (61.56) 1.16 (0.99-1.35) 0.075
OAS2 rs2239193 A>G c
 AA 1029 682 (66.28) 1.00 609 (59.18) 1.00
 AG 141 103 (73.05) 1.36 (1.10-1.68) 0.004 97 (68.79) 1.43 (1.15-1.78) 0.002
 GG 3 2 (66.67) 2.62 (0.64-10.75) 0.180 1 (33.33) 1.76 (0.24-12.69) 0.575
 Trend test 0.002 0.002
Dominant
 AA 1029 682 (66.28) 1.00 609 (59.18) 1.00
AG+GG 144 105 (72.92) 1.38 (1.11-1.70) 0.003 98 (68.06) 1.43 (1.15-1.78) 0.001
CCL25 rs3136651 T>A d
 TT 798 538 (67.42) 1.00 485 (60.78) 1.00
 TA 330 224 (67.88) 0.89 (0.76-1.04) 0.149 199 (60.30) 0.88 (0.75-1.04) 0.139
 AA 33 15 (45.45) 0.42 (0.25-0.71) 0.001 14 (42.42) 0.49 (0.29-0.85) 0.011
 Trend test 0.003 0.009
Dominant
 TT 798 538 (67.42) 1.00 485 (60.78) 1.00
 TA+AA
Or reverse
363 239 (65.84) 0.84 (0.72-0.98) 0.024 213 (58.68) 0.84 (0.72-0.99) 0.037
 TA+AA 363 239 (65.84) 1.00 213 (58.68) 1.00
TT 798 538 (67.42) 1.20 (1.02- 1.40) 0.024 485 (60.78) 1.19 (1.01-1.40) 0.037
NUG e
 0 226 143 (63.27) 1.00 133 (58.85) 1.00
 1 590 393 (66.61) 1.13 (0.93-1.38) 0.206 342 (57.97) 1.05 (0.86-1.29) 0.616
 2 312 217 (69.55) 1.45 (1.17-1.79) 0.0007 199 (63.78) 1.40 (1.12-1.75) 0.003
 3 31 22 (70.97) 1.80 (1.12-2.89) 0.015 22 (70.97) 1.95 (1.21-3.13) 0.006
 Trend test <0.0001 0.0002
Dichotomized NUG
 0-1 816 536 (65.69) 1.00 475 (58.21) 1.00
 2-3 343 239 (69.68) 1.35 (1.15-1.58) 0.0002 221 (64.43) 1.39 (1.18-1.63) <0.0001

SNP, single nucleotide polymorphism; NSCLC, non-small cell lung cancer; OS, overall survival; DSS, disease-specific survival. PLCO, Prostate, Lung, Colorectal and Ovarian cancer screening trial; HR, hazards ratio; CI, confidence interval; NPA, number of protective alleles.

a

Adjusted for age, sex, smoking status, histology, tumor stage, chemotherapy, surgery, radiotherapy and principal components.

b

10 with missing data were excluded.

c

12 with missing data were excluded.

d

24 with missing data were excluded.

e

Unfavorable genotypes were LRRC8C rs10493829 TT, OAS2 rs2239193 AG+GG, and CCL25 rs3136651 TT and their results are in bold.