Table 2. Genome assembly data for Bugula neritina, tzBugNeri2.1.
| Genome assembly | ||
|---|---|---|
| Assembly name | tzBugNeri2.1 | |
| Assembly accession | GCA_964035545.1 | |
| Accession of alternate haplotype | GCA_964035465.1 | |
| Span (Mb) | 216.00 | |
| Number of contigs | 431 | |
| Contig N50 length (Mb) | 4.0 | |
| Number of scaffolds | 320 | |
| Scaffold N50 length (Mb) | 24.8 | |
| Longest scaffold (Mb) | 35.64 | |
| Assembly metrics * | Benchmark | |
| Consensus quality (QV) | 53.7 | ≥ 50 |
| k-mer completeness | 99.99% | ≥ 95% |
| BUSCO ** | C:83.4%[S:82.7%,D:0.7%],
F:7.5%,M:9.1%,n:954 |
C ≥ 95% |
| Percentage of assembly mapped
to chromosomes |
92.7% | ≥ 95% |
| Sex chromosomes | None | localised homologous pairs |
| Organelles | Mitochondrial genome: 15.25 kb | complete single alleles |
| Genome annotation of assembly GCA_964035545.1 at Ensembl | ||
| Number of protein-coding genes | 20,264 | |
| Number of non-coding genes | 1,222 | |
| Number of gene transcripts | 33,722 | |
* Assembly metric benchmarks are adapted from column VGP-2020 of “Table 1: Proposed standards and metrics for defining genome assembly quality” from Rhie et al. (2021).
** BUSCO scores based on the metazoa_odb10 BUSCO set using version 5.4.3. C = complete [S = single copy, D = duplicated], F = fragmented, M = missing, n = number of orthologues in comparison. A full set of BUSCO scores is available at https://blobtoolkit.genomehubs.org/view/Bugula_neritina/dataset/GCA_964035545.1/busco.