Table 2.
Genes | Gene stop | IGR | Gene Start | |
---|---|---|---|---|
SMPV-1 | /N | - | CTT | AGGAGCAAAG |
N/P | TTAAGAAAAA | CTT | AGGAACAAGG | |
P/M | TTATAAAAAA | CTT | AGGAGTAAGG | |
M/F | TTAAGAAAAA | CTT | AGGCACAAAG | |
F/SH | ATACAAAAAA | CTT | AGGGAAAAAG | |
SH/TM | CTAAGAAAAA | CTT | AGGGCAAATG | |
TM/G | CTAAGAAAAA | CTT | AGGAGTAAAG | |
G/L | TTAAGAAAAA | CTT | AGGATCAAAG | |
L/ | TTAAGAAAAA | - | - | |
Consensus | HTAHRAAAAA | CTT | AGGVNHAADG | |
SMPV-2 | /N | - | CTT | AGGGACAAAG |
N/P | TTAAGAAAAA | CTT | AGGATTAAAG | |
P/M | TTAAGAAAAA | CTT | AGGAAGAAAG | |
M/F | TTAGAAAAAA | CTT | AGGAGCAAAG | |
F/TM | TAATAAAAAA | CTT | AGGGTCAATG | |
TM/G | TTAAGAAAAA | CTT | AGGACTAATG | |
G/L | TTATAAAAAA | CTT | AGGGACTAAC | |
L/ | TTAAGAAAAA | - | - | |
Consensus | - | TWADRAAAAA | CTT | AGGRNBWAWS |
Abbreviation SMPV-1, Samak Micromys paramyxovirus 1; SMPV-2, Samak Micromys paramyxovirus 2; N, nucleocapsid protein; P, phosphoprotein; M, matrix protein; F, fusion protein; SH, small hydrophobic protein; TM, transmembrane protein; G, glycoprotein; H, hemagglutinin protein; HN, hemagglutinin-neuraminidase protein; L, large protein