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. 2024 Oct 10;109:239–263. doi: 10.3897/mycokeys.109.134136

Table 2.

Details of genetic markers with PCR primers and thermal cycling program for PCR amplification.

Genetic Marker Primers PCR thermal cycle protocols References
The 18S small subunit rDNA (SSU) NS1 aAnnealing at 55 °C for 15 sc White et al. (1990)
NS4
The 28S large subunit rDNA (LSU) LR0R Rehner and Samuels (1994)
LR5 Vilgalys and Hester (1990)
The internal transcribed spacers (ITS) ITS5 White et al. (1990)
ITS4
The translation elongation factor 1-alpha (tef1-α) EF1-983F aAnnealing at 55 °C for 30 sc Rehner and Buckley (2005)
EF1-2218R
The partial RNA polymerase second largest subunit (rpb2) fRPB2-5F bAnnealing at 57 °C for 50 sc Liu et al. (1999)
fRPB2-7cR

Notes: a initial denaturation at 94 °C for 3 min, followed by 35 cycles of denaturation at 94 °C for 10 s, elongation at 72 °C for 20 s; b initial denaturation at 95 °C for 3 min, followed by 35 cycles at 95 °C for 45 s, elongation at 72 °C for 1.5 min; c final extension at 72 °C for 10 min.