Table 2.
Task | Method | Reference | Sensitivity | Specificity | F1 |
---|---|---|---|---|---|
Antimicrobial | AMP-Detector | — | 0.91 | 0.85 | 0.88 |
AMP-discover | [31] | 0.66 | 0.78 | 0.74 | |
amplify | [32] | 0.8 | 0.7 | 0.72 | |
TPpred-LE | [30] | 0.62 | 0.71 | 0.71 | |
AMPScanner | [33] | 0.59 | 0.55 | 0.55 | |
Antifungal | AMP-Detector | — | 0.85 | 0.79 | 0.84 |
AMPfun | [34] | 0.6 | 0.56 | 0.67 | |
IAMP-RAAC | [35] | 0.59 | 0.54 | 0.67 | |
AMP-discover | [31] | 0.53 | 0.38 | 0.61 | |
DeepAFP | [36] | 0.55 | 0.44 | 0.52 | |
TPpred-LE | [30] | 0.75 | 0.46 | 0.14 | |
Antibacterial | AMP-Detector | — | 0.95 | 0.81 | 0.96 |
AMP-discover | [31] | 0.92 | 0.39 | 0.89 | |
AntiBP3 Gram variable | [37] | 0.98 | 0.39 | 0.86 | |
AntiBP3 Gram (−) | [37] | 0.94 | 0.3 | 0.82 | |
AntiBP3 Gram + | [37] | 0.94 | 0.3 | 0.82 | |
DBAASP E. coli | [38] | 0.98 | 0.21 | 0.59 | |
DBAASP S. aureus | [38] | 0.98 | 0.19 | 0.49 | |
AMPActiPred | [38] | 0.84 | 0.13 | 0.49 | |
DBAASP Klebsiella | [38] | 0.99 | 0.18 | 0.45 | |
TPpred-LE | [30] | 0.97 | 0.17 | 0.41 | |
DBAASP Pseudomonas | [38] | 0.97 | 0.17 | 0.4 | |
Antiparasitic | AMP-Detector | — | 0.89 | 0.8 | 0.84 |
AMP-discover | [31] | 0.56 | 0.56 | 0.66 | |
AMPfun | [34] | 0.67 | 0.48 | 0.2 | |
IAMP-RAAC | [35] | 0.49 | 0.46 | 0.16 | |
multipep_max | [39] | 0.71 | 0.47 | 0.07 | |
TPpred-LE | [30] | 1.0 | 0.47 | 0.01 | |
Antiviral | AMP-Detector | — | 0.76 | 0.77 | 0.78 |
IAMP-RAAC | [35] | 0.72 | 0.65 | 0.68 | |
TPpred-LE | [30] | 0.89 | 0.65 | 0.67 | |
AMPfun | [34] | 0.75 | 0.63 | 0.66 | |
AMP-discover | [31] | 0.56 | 0.57 | 0.66 | |
DeepAVP | [40] | 0.52 | 0.46 | 0.57 | |
AVP-IFT | [12] | 0.52 | 0.47 | 0.46 |