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. 2024 Oct 18;7:236. doi: 10.1038/s42004-024-01324-x

Table 3.

Sweetness data at 300 ppm20 and calculated binding energies (kcals/mol) of various steviol glycosides at the closed venus fly trap domain 2 (cVFD2), transmembrane domain 2 (TMD2), TMD3, and open VFD3

Ligand Sweetness at 300 ppm Ucav E (kal/mol) BE order
cVFD2 TMD2 TMD3 oVFD3
Reb1-5 7.40 –156.96 –102.72 –26.20 –38.83 VFD2>TMD2>VFD3>TMD3
RebM 6.55 –135.74 –89.80 –34.23 –7.09 VFD2>TMD2>TMD3>VFD3
RebD 6.15 –123.85 –70.85 –47.90 –86.27 VFD2>VFD3>TMD2>TMD3
isoRebM 6.01 –119.92 –79.40 –40.36 –48.98 VFD2>TMD2>VFD3>TMD3
RebA 5.90 –104.15 –70.92 –85.19 –82.31 VFD2>TMD3>VFD3>TMD2
RebB 5.20 –72.84 –96.11 –98.53 –24.48 TMD3>TMD2>VFD2>VFD3
Rubu 3.87 –64.66 –52.21 –61.30 –82.41 VFD3>VFD2>TMD3>TMD2
Reb1-2 3.13 –178.39 –102.69 –57.41 –38.29 VFD2>TMD2>TMD3>VFD3
RebC 2.64 –101.22 –97.15 –77.10 –52.18 VFD2>TMD2>TMD3>VFD3
hydRebM 1.14 –125.02 –91.55 –42.71 –44.69 VFD2>TMD2>VFD3>TMD3
Ligand C20 at TMD3 Ucav E (kal/mol) BE order
VFD2 TMD2 TMD3 oVFD3
RebM –125.44 –86.23 –17.96 –102.80 VFD2>VFD3>TMD2>TMD3
RebD –98.10 –80.84 –74.23 –70.02 VFD2>TMD2>TMD3>VFD3
Rubu –84.77 –61.66 –39.08 –42.10 VFD2>TMD2>VFD3>TMD3
RebC –94.57 –79.47 –75.47 –40.81 VFD2>TMD2>TMD3>VFD3
Ligand C20 at TMD2 Ucav E (kal/mol) BE order
VFD2 TMD2 TMD3 oVFD3
RebM –98.37 –52.10 –64.81 –95.54 VFD2>VFD3>TMD3>TMD2
RebD –85.13 –75.83 –60.62 –82.11 VFD2>VFD3>TMD2>TMD3
Rubu –43.88 –69.10 –50.80 –75.95 VFD3>TMD2>TMD3>VFD2
RebC –79.54 –43.27 –83.24 –71.82 TMD3>VFD2>VFD3>TMD2

The binding energy (BE) was ordered unified cavity energy (UCav E), which is the sum of the non-bonding energy in the unified binding site within 5 Å of ligands.