Table 4.

Number of found cilia depending on the tool.

Additional medium components	detectCilia			ACDC				CiliaQ (2D)
	Aut.	FP	$n_{\mathrm{CILIA}}$	Aut.	FP	FN	$n_{\mathrm{CILIA}}$	Aut.	FP	$n_{\mathrm{CILIA}}$
ITS	102	1	101	90	25	54	119	129	14	115
ITS with Dexa	274	0	274	249	34	75	290	308	14	294
ITS with Dexa + IGF + TGF	238	12	226	141	13	82	174	365	133	232
FBS	183	16	167	126	79	59	106	297	131	166

Aut. corresponds to the number of automatically determined cilia by the specific tool. FP stands for the number of false positives, and FN the number of false-negative cilia. $n_{\mathrm{CILIA}}$ is the corrected number of cilia used for further analyses. Note that cilia detected by detectCilia touching a z border were not removed for this table.