TABLE 4.
Function groups of the enriched cellular proteins identified in rPICV virions
Functional groups | Proteins identified in rPICV virions |
---|---|
ESCRT pathway | Chmp1b, Chmp2a, Chmp4b, Pdcd6ip (ALIX), Tsg101, Vps37b, Vps4b, Cep55, Ist1 |
Ras-related proteins | Rab1a, Rab5a, Rab5b, Rab5c, Rab7a, Rab8a, Rab8b, Rab10, Rab11b, Rab13, Rab35, Rac1, Rala, Ralb, Rap1b, Rras2 |
Membrane re-organization, vesicle transport | Arf3, Ehd1, Ehd2, Ehd3, Ehd4, Ezr, Flot1, Flot2, Msn, Pacsin2, Sdc1, Sdc2, Sdc4, Sdcbp, Sh3gl1, YBX1 |
Cytoskeleton organization | Cfl1, Ezr, Krt15, Msn, Sdcbp, Tagln2, ThymB4X, Tmsb10 |
Receptors and signaling molecules | Cd36, Cd44, Cd81, Cd82, Cd151, Epha2, Tfr1, Gnai2, Gnb1(GNB2), Itch, Mxra8, |
Transporters | Atp1a1, Atp2b1, Cacna2d1, Slc1a4, Slc1a5, Slc3a2, Slc44a2, Slc7a5, Slc16a1, Stom |
Tetraspanins | Tspan5, Tspan7, Cd81, CLDN3 |
Other transmembrane proteins | Cspg4, Ptgfrn, Adam10, Cd63, Gja1, Jam3, Kirrel, Tmem2 (Cemip2) |
Extracellular matrix (ECM) and ECM-binding proteins such as integrins | Anxa2, Anxa6, Cd81, Igsf8, Itga3, Itga5, Itgav, Itgb1-a, Mfge8, Mxra8 |
Chaperones | Dnaja1, Dnaja2, HSP90AA1, HSP90AB1, HSPA1A, HSPA5, HSPA8, ST13 |
Protein biosynthesis | Eef2, Eif4a1(ENP3), Pa2g4, PAIP1, PKM, Rack1(TRIM7, Gnb2l1), Rpl11, Rpl13, Rpl13a, Rpl15, Rpl17, Rpl18, Rpl3, Rpl4, RPL6, Rpl7, Rpl7a, Rps16, Rps18, RPS2, Rps27a, Rps3, Rps3a, Rps6, Rps8 |