TABLE 2.
rsID | Nearest gene | CHR | POS | EA/NEA | EAF | BETA | p value | HetISq | HetChiSq | HetPVal |
---|---|---|---|---|---|---|---|---|---|---|
rs429358 | APOE | 19q13.32 | 45411941 | C/T | 0.1515 | 1.1728 | 6.87E‐305 | 98.3 | 1104.478 | 2.534E‐222 |
rs4663105 | BIN1 | 2q14.3 | 127891427 | C/A | 0.4151 | 0.156 | 5.856E‐34 | 63.4 | 51.892 | 0.00006868 |
rs12453 | MS4A6A | 11q12.2 | 59945745 | C/T | 0.3998 | −0.0933 | 1.116E‐16 | 13.2 | 23.037 | 0.287 |
rs10792832 | PICALM | 11q14.2 | 85867875 | A/G | 0.3585 | −0.0857 | 8.234E‐14 | 61.8 | 52.41 | 0.0000992 |
rs10948367 | CD2AP | 6p12.3 | 47585615 | G/A | 0.2712 | 0.0886 | 4.041E‐13 | 4.2 | 20.88 | 0.4042 |
rs4295 | ACE | 17q23.3 | 61556298 | C/G | 0.3897 | −0.0784 | 1.014E‐11 | 10.8 | 22.43 | 0.3176 |
rs4844610 | CR1 | 1q32.2 | 207802552 | A/C | 0.1846 | 0.0961 | 1.245E‐11 | 71.4 | 66.468 | 3.519E‐07 |
rs2906644 | PILRB | 7q22.1 | 99956290 | G/C | 0.1294 | −0.1016 | 7.627E‐09 | 0 | 8.219 | 0.9616 |
rs3764650 | ABCA7 | 19p13.3 | 1046520 | G/T | 0.0957 | 0.1141 | 1.125E‐08 | 35 | 24.604 | 0.07712 |
rs9323877 | SLC24A4 | 14q32.12 | 92934269 | G/A | 0.2521 | 0.0699 | 3.804E‐08 | 0 | 19.881 | 0.4654 |
rs1532278 | CLU | 8p21.1 | 27466315 | T/C | 0.3819 | −0.0629 | 6.262E‐08 | 66.2 | 59.185 | 9.516E‐06 |
rs7912495 | USP6NL | 10p14 | 11718713 | G/A | 0.4612 | 0.0684 | 6.774E‐08 | 0 | 15.343 | 0.7006 |
rs17125924 | FERMT2 | 14q22.1 | 53391680 | G/A | 0.0928 | 0.1009 | 9.38E‐08 | 2.6 | 19.508 | 0.4247 |
rs11767557 | EPHA1 | 7q34 | 143109139 | C/T | 0.1998 | −0.0742 | 9.721E‐08 | 31.2 | 29.052 | 0.08675 |
rs1854554 | SEMA4D | 9q22.2 | 92155871 | A/G | 0.409 | 0.0598 | 1.096E‐07 | 4 | 20.83 | 0.4072 |
rs7118826 | ANO3 | 11p14.2 | 26195535 | G/C | 0.4585 | 0.0686 | 1.238E‐07 | 18.7 | 23.368 | 0.2215 |
rs79832570 | SPATC1 | 8q24.3 | 145097720 | C/T | 0.086 | 0.1433 | 1.385E‐07 | 37.3 | 19.147 | 0.08504 |
rs13010870 | RBM43 | 2q23.3 | 151765163 | C/T | 0.2162 | −0.0732 | 1.649E‐07 | 0 | 18.774 | 0.5366 |
rs1354106 | CD33 | 19q13.41 | 51737991 | G/T | 0.3441 | −0.0614 | 1.673E‐07 | 6.4 | 21.373 | 0.3755 |
rs6014724 | CASS4 | 20q13.2 | 54998544 | G/A | 0.0874 | −0.1071 | 1.863E‐07 | 0 | 18.603 | 0.4825 |
rs897150 | TRIB1 | 8q24.13 | 126576702 | A/G | 0.3016 | −0.0634 | 2.33E‐07 | 4 | 20.842 | 0.4065 |
rs11168036 | HBEGF | 5q31.3 | 139707439 | T/G | 0.4933 | 0.0572 | 2.336E‐07 | 0 | 18.21 | 0.5735 |
rs17269688 | NCK2 | 2q12.2 | 106469267 | G/A | 0.025 | −0.1937 | 2.389E‐07 | 41.8 | 27.478 | 0.03647 |
rs677649 | RNU6‐11P | 7 | 123439244 | T/G | 0.1756 | 0.0851 | 2.505E‐07 | 9.9 | 19.987 | 0.3336 |
rs8081878 | ZNF652 | 17q21.32 | 47436812 | T/A | 0.4634 | 0.057 | 2.609E‐07 | 9.9 | 22.19 | 0.3303 |
rs4654450 | RP1‐37J18.2 | 1 | 4667378 | G/A | 0.3314 | −0.0697 | 2.684E‐07 | 16.2 | 22.679 | 0.2518 |
rs11218343 | SORL1 | 11q24.1 | 121435587 | C/T | 0.0364 | −0.1658 | 2.909E‐07 | 20.7 | 21.432 | 0.2076 |
rs2297508 | SREBF1 | 17p11.2 | 17715317 | C/G | 0.3659 | −0.0585 | 4.604E‐07 | 31.9 | 29.367 | 0.08078 |
rs442495 | ADAM10 | 15q21.3 | 59022615 | C/T | 0.3245 | −0.0599 | 4.722E‐07 | 41 | 33.895 | 0.02684 |
rs13316744 | AC091493.2 | 3 | 16742711 | C/G | 0.4544 | −0.0549 | 7.609E‐07 | 0 | 15.72 | 0.7338 |
rs7068231 | ANK3 | 10q21.2 | 61784928 | T/G | 0.4005 | −0.0579 | 7.833E‐07 | 11.1 | 22.503 | 0.3139 |
rs834398 | GABRB2 | 5q34 | 160528276 | G/A | 0.1971 | 0.0793 | 8.951E‐07 | 0 | 11.885 | 0.8905 |
rs62013908 | RBFOX1 | 16p13.3 | 5991314 | G/C | 0.2547 | 0.0724 | 9.422E‐07 | 3.9 | 19.767 | 0.4087 |
Note: Genome‐wide significant variants are highlighted in orange.